BS23368.complete Sequence
584 bp assembled on 2011-01-25
GenBank Submission: KX803278
> BS23368.complete
GAAGTTATCAGTCGACATGAAAAACGAGATTCGACTGATATGTTGGTATA
TAAACCAGAGGATTGAGCTTTCTTCGTTTAGATCACAAAATCTCCCCAAA
ACGAAAATGAAACTTCTTCTGGTTCTGGCATTGGCAGTCTTCGTAGCCCA
CGTGGCTGTGGCCCAGACAACTGATTCGTCTGACGATGGAGATTACTCTT
ACGATTACGCTGATGACAACGATACTGCCGGTAGCTCCGAAGACAACACT
GCTGATTCTGGAGACACTAGTGATAGCTCCACTGACGTCGACAGTGGAAA
CGACTCTGGGGACGTCGATTCCTATGACGACTACGAGGGCTCTAGCGATG
TTACGGAAGCACCAACTGCTGCTCCAGTTGTCAAAAAGAACAAAAGAGCT
GGTGCCAGGAAAAACAACAGGAACAACAAGAATAAGGCAGCAGCTAAACG
TCGCAATGCCGCCGCTGCCAAGAAAAGTAATAACAAGAAGGCGGCTAAGA
AGCGAACACCTGTTGCCGCCAAGAAGCGGGCAAATGCTGGACCCAACAAA
CGTAGGCGCTCTGGATAAAAGCTTTCTAGACCAT
BS23368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17362-RB | 462 | CG17362-PB | 1..462 | 107..568 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17362-RB | 565 | CG17362-RB | 1..498 | 72..569 | 2490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13986564..13987117 | 16..569 | 2770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:32:42 has no hits.
BS23368.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:57 Download gff for
BS23368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17362-RA | 2..551 | 17..566 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:32 Download gff for
BS23368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17362-RB | 1..495 | 72..566 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:47 Download gff for
BS23368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17362-RB | 1..495 | 72..566 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:47 Download gff for
BS23368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13986565..13987114 | 17..566 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:32 Download gff for
BS23368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13979665..13980214 | 17..566 | 100 | | Plus |
BS23368.pep Sequence
Translation from 16 to 567
> BS23368.pep
MKNEIRLICWYINQRIELSSFRSQNLPKTKMKLLLVLALAVFVAHVAVAQ
TTDSSDDGDYSYDYADDNDTAGSSEDNTADSGDTSDSSTDVDSGNDSGDV
DSYDDYEGSSDVTEAPTAAPVVKKNKRAGARKNNRNNKNKAAAKRRNAAA
AKKSNNKKAAKKRTPVAAKKRANAGPNKRRRSG*
BS23368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17362-PB | 153 | CG17362-PB | 1..153 | 31..183 | 772 | 100 | Plus |
CG9040-PA | 161 | CG9040-PA | 1..161 | 31..183 | 253 | 42.9 | Plus |
Pig1-PB | 172 | CG10790-PB | 4..166 | 29..182 | 189 | 35.5 | Plus |