Clone BS23368 Report

Search the DGRC for BS23368

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:233
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG17362-RB
Protein status:BS23368.pep: gold
Sequenced Size:584

Clone Sequence Records

BS23368.complete Sequence

584 bp assembled on 2011-01-25

GenBank Submission: KX803278

> BS23368.complete
GAAGTTATCAGTCGACATGAAAAACGAGATTCGACTGATATGTTGGTATA
TAAACCAGAGGATTGAGCTTTCTTCGTTTAGATCACAAAATCTCCCCAAA
ACGAAAATGAAACTTCTTCTGGTTCTGGCATTGGCAGTCTTCGTAGCCCA
CGTGGCTGTGGCCCAGACAACTGATTCGTCTGACGATGGAGATTACTCTT
ACGATTACGCTGATGACAACGATACTGCCGGTAGCTCCGAAGACAACACT
GCTGATTCTGGAGACACTAGTGATAGCTCCACTGACGTCGACAGTGGAAA
CGACTCTGGGGACGTCGATTCCTATGACGACTACGAGGGCTCTAGCGATG
TTACGGAAGCACCAACTGCTGCTCCAGTTGTCAAAAAGAACAAAAGAGCT
GGTGCCAGGAAAAACAACAGGAACAACAAGAATAAGGCAGCAGCTAAACG
TCGCAATGCCGCCGCTGCCAAGAAAAGTAATAACAAGAAGGCGGCTAAGA
AGCGAACACCTGTTGCCGCCAAGAAGCGGGCAAATGCTGGACCCAACAAA
CGTAGGCGCTCTGGATAAAAGCTTTCTAGACCAT

BS23368.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG17362-RB 462 CG17362-PB 1..462 107..568 2310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17362-RB 565 CG17362-RB 1..498 72..569 2490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13986564..13987117 16..569 2770 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:32:42 has no hits.

BS23368.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:57 Download gff for BS23368.complete
Subject Subject Range Query Range Percent Splice Strand
CG17362-RA 2..551 17..566 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:32 Download gff for BS23368.complete
Subject Subject Range Query Range Percent Splice Strand
CG17362-RB 1..495 72..566 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:47 Download gff for BS23368.complete
Subject Subject Range Query Range Percent Splice Strand
CG17362-RB 1..495 72..566 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:47 Download gff for BS23368.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13986565..13987114 17..566 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:32 Download gff for BS23368.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13979665..13980214 17..566 100   Plus

BS23368.pep Sequence

Translation from 16 to 567

> BS23368.pep
MKNEIRLICWYINQRIELSSFRSQNLPKTKMKLLLVLALAVFVAHVAVAQ
TTDSSDDGDYSYDYADDNDTAGSSEDNTADSGDTSDSSTDVDSGNDSGDV
DSYDDYEGSSDVTEAPTAAPVVKKNKRAGARKNNRNNKNKAAAKRRNAAA
AKKSNNKKAAKKRTPVAAKKRANAGPNKRRRSG*

BS23368.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG17362-PB 153 CG17362-PB 1..153 31..183 772 100 Plus
CG9040-PA 161 CG9040-PA 1..161 31..183 253 42.9 Plus
Pig1-PB 172 CG10790-PB 4..166 29..182 189 35.5 Plus