BS23370.complete Sequence
833 bp assembled on 2011-02-07
GenBank Submission: KX803076
> BS23370.complete
GAAGTTATCAGTCGACATGACAGCAATGAATGCGGATGAGACAAAGCTGG
CTGGAATGCCTCAAGGAGCTGAGGAGGAGCAGGAACCGGAGAGGGAGCAG
AAGAAGGAGAGCGATGGAGCAGCAGCTGCAGCAGGAGTACAGTGTGATCC
TGATAGCAGAATAGTGGCTCCGCCGCCCAGGCAGCGGACTCTGACAAGGA
CGGCCGAACTGGACGCGGACTGCGAGGACATCGAGTTAGATGCCGACGAT
GGTTTGGACGATGCGGCGGATAGCATCACCTTGGAGTTGGCCCTATCGCC
GCACAGCAGCGCCACGCCCACGCCCTCGCCCACCACCGCCGACGAGGATT
TCGCCCAGCTGGACAACAGCAAGCCCTTCAAGATCAAGGACATCACGAGG
AACATCCGCAAGGCAGTTGTGGCCACAACGCTGTCGGAGCTGCGGACGAA
GGTGTCGCTGAAATTTGAGCGGGCTCAGCCGGCGATACACCTGGATTGCG
ATGGCACCGAGGTCGACGATGAGGAGTACTTCAGCACTCTGGAGCCAAAT
GCCGAATTGATTGCCGTCTTTCCTGGCGAGCAGTGGCGCGATCCCAGTGA
CTACAATGCCAATCTGCGTCGCACATCGCTGGATGCACAGCGTCTGCGGA
GTCTGGTGAGCAAACTGCAGCCGAACTATATGAACGATGATGATTTGGAT
AAGCTGTCGAACATGGATCCCAACTCCCTGGTGGATATCACGGGTCGGGA
GCCCAAGGACAACGAATACTCAGCCAGAAGCGATGCCGCACGGCTATCAA
CGGAATTGTCTTGCTAAAAGCTTTCTAGACCAT
BS23370.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:11:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Drep-3-RA | 801 | CG8364-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
Drep-3-RB | 801 | CG8364-PB | 1..801 | 17..817 | 4005 | 100 | Plus |
Drep-1-RB | 921 | CG8357-PB | 157..273 | 488..604 | 180 | 76.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:11:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Drep-3-RA | 1799 | CG8364-RA | 176..978 | 15..817 | 4015 | 100 | Plus |
Drep-3-RB | 1558 | CG8364-RB | 181..983 | 15..817 | 4015 | 100 | Plus |
CG44314-RC | 974 | CG44314-RC | 446..813 | 15..382 | 1840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:11:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12056019..12056386 | 15..382 | 1840 | 100 | Plus |
2R | 25286936 | 2R | 12061821..12062045 | 593..817 | 1125 | 100 | Plus |
2R | 25286936 | 2R | 12061502..12061717 | 377..592 | 1065 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:11:14 has no hits.
BS23370.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 10:59:37 Download gff for
BS23370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Drep-3-RA | 179..977 | 17..815 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:40 Download gff for
BS23370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Drep-3-RB | 183..981 | 17..815 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:40 Download gff for
BS23370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Drep-3-RB | 183..981 | 17..815 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:40 Download gff for
BS23370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12056021..12056386 | 17..382 | 100 | -> | Plus |
2R | 12061508..12061717 | 383..592 | 100 | -> | Plus |
2R | 12061821..12062043 | 593..815 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:40 Download gff for
BS23370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7943526..7943891 | 17..382 | 100 | -> | Plus |
arm_2R | 7949013..7949222 | 383..592 | 100 | -> | Plus |
arm_2R | 7949326..7949548 | 593..815 | 100 | | Plus |
BS23370.pep Sequence
Translation from 16 to 816
> BS23370.pep
MTAMNADETKLAGMPQGAEEEQEPEREQKKESDGAAAAAGVQCDPDSRIV
APPPRQRTLTRTAELDADCEDIELDADDGLDDAADSITLELALSPHSSAT
PTPSPTTADEDFAQLDNSKPFKIKDITRNIRKAVVATTLSELRTKVSLKF
ERAQPAIHLDCDGTEVDDEEYFSTLEPNAELIAVFPGEQWRDPSDYNANL
RRTSLDAQRLRSLVSKLQPNYMNDDDLDKLSNMDPNSLVDITGREPKDNE
YSARSDAARLSTELSC*
BS23370.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Drep-3-PA | 266 | CG8364-PA | 1..266 | 1..266 | 1364 | 100 | Plus |
Drep-3-PB | 266 | CG8364-PB | 1..266 | 1..266 | 1364 | 100 | Plus |
Drep-1-PA | 297 | CG8357-PA | 9..168 | 116..245 | 382 | 51.9 | Plus |
Drep-1-PB | 306 | CG8357-PB | 9..168 | 116..245 | 382 | 51.9 | Plus |
Drep-2-PB | 549 | CG1975-PB | 59..151 | 101..190 | 150 | 38.7 | Plus |