BS23374.complete Sequence
691 bp assembled on 2011-01-25
GenBank Submission: KX805432
> BS23374.complete
GAAGTTATCAGTCGACATGTATGAGGCTTGTTTCCCACGCAAAAGAAATT
GTTTTCTTTCAAGTATCGTTACGCGTGGGTATTTGAAGTGTTTAAAGATT
TTAACACGCATATTTTTGTGCTTTATTTTCAGCATTATGGGCGACTTGAG
CTGGAAAGATTTTTTGAGCCAGGCCAAGCAGTTCCTCGAAATTTCGCAGA
AGTTGGGTGATAATTGGATATTGGAACAAAAGGACTCGAATGAACCAAAC
ACCTATCTCAAATGTAGTCAGAAGATTAAATGCCGAGGTGGCAAGGACAA
CTCGGCTGAGTTGGTTAGTGTGGAGTACCATGTGGTCTTCAGTGTTTCCT
ATCAAGTACCAATGTTGTTCTTCCAGGCACACAGATCAGATGGAAGTCTT
TTGGATGTGGAGGCCACTTGGCGAATGTTCATGCCCGAATCGAAGGCCAG
CGATCTCCACCAGATACTCACCCAGATGGATCACCCGGTGCTTTTCAGAC
CCTTTATGGCATTGCATCCATGCCGCACCGCCGAAGTGCTAAAGCAGTTC
GGAAAGCCCAGCTGCAACCAGGTGCTTACCTTCATCAGTCTGTACGGACC
CCACGTGCAGTTGCACCTGCAAAATGCGTACGGCTTAAGCCAAGAGTATA
CGTAAAAGCTTTCTAGACCATTCGTTTGGCGCGCAAAACGG
BS23374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:32:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Atg10-RD | 519 | CG12821-PD | 1..519 | 137..655 | 2595 | 100 | Plus |
Atg10-RB | 519 | CG12821-PB | 1..519 | 137..655 | 2595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:32:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Atg10-RD | 1516 | CG12821-RD | 52..576 | 131..655 | 2625 | 100 | Plus |
Atg10-RB | 1200 | CG12821-RB | 52..576 | 131..655 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:32:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7834311..7834578 | 388..655 | 1340 | 100 | Plus |
2R | 25286936 | 2R | 7833818..7834034 | 17..233 | 1085 | 100 | Plus |
2R | 25286936 | 2R | 7834096..7834255 | 230..389 | 800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:32:56 has no hits.
BS23374.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:15:59 Download gff for
BS23374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12821-RC | 1340..1981 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:38 Download gff for
BS23374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12821-RB | 52..579 | 131..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:54 Download gff for
BS23374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Atg10-RB | 52..579 | 131..662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:54 Download gff for
BS23374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7834099..7834255 | 233..389 | 100 | -> | Plus |
2R | 7834313..7834581 | 390..662 | 98 | | Plus |
2R | 7833818..7834033 | 17..232 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:38 Download gff for
BS23374.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3721323..3721538 | 17..232 | 100 | -> | Plus |
arm_2R | 3721604..3721760 | 233..389 | 100 | -> | Plus |
arm_2R | 3721818..3722086 | 390..662 | 98 | | Plus |
BS23374.pep Sequence
Translation from 16 to 654
> BS23374.pep
MYEACFPRKRNCFLSSIVTRGYLKCLKILTRIFLCFIFSIMGDLSWKDFL
SQAKQFLEISQKLGDNWILEQKDSNEPNTYLKCSQKIKCRGGKDNSAELV
SVEYHVVFSVSYQVPMLFFQAHRSDGSLLDVEATWRMFMPESKASDLHQI
LTQMDHPVLFRPFMALHPCRTAEVLKQFGKPSCNQVLTFISLYGPHVQLH
LQNAYGLSQEYT*
BS23374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Atg10-PD | 172 | CG12821-PD | 1..172 | 41..212 | 916 | 100 | Plus |
Atg10-PB | 172 | CG12821-PB | 1..172 | 41..212 | 916 | 100 | Plus |