BS23386.complete Sequence
364 bp assembled on 2011-01-25
GenBank Submission: KX803228
> BS23386.complete
GAAGTTATCAGTCGACATGACTGGTCGTGGAAAGGGAGGCAAAGGATTGG
GAAAGGGGGGCGCCAAGCGTCATCGTAAGGTGCTTCGTGATAACATCCAG
GGTATCACCAAGCCTGCTATTCGCCGTTTGGCTCGTCGCGGCGGTGTTAA
GCGTATCTCTGGCTTGATTTACGAGGAAACTCGCGGTGTGCTAAAGGTAT
TCCTTGAGAACGTTATCCGTGACGCTGTCACCTACACCGAGCACGCCAAG
CGCAAGACCGTGACCGCCATGGACGTGGTCTATGCCCTCAAGCGCCAGGG
ACGCACCCTTTACGGATTTGGCGGTTAAAAGCTTTCTAGACCATTCGTTT
GGCGCTCTAAACGG
BS23386.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:33:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His4r-RD | 312 | CG3379-PD | 1..312 | 17..328 | 1560 | 100 | Plus |
| His4r-RC | 312 | CG3379-PC | 1..312 | 17..328 | 1560 | 100 | Plus |
| His4r-RB | 312 | CG3379-PB | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His4r-RD | 553 | CG3379-RD | 53..364 | 17..328 | 1560 | 100 | Plus |
| His4r-RC | 753 | CG3379-RC | 263..574 | 17..328 | 1560 | 100 | Plus |
| His4r-RB | 645 | CG3379-RB | 155..466 | 17..328 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14626050..14626232 | 17..199 | 915 | 100 | Plus |
| 2L | 23513712 | 2L | 21419574..21419887 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21424636..21424949 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21429698..21430011 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21434746..21435059 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21439632..21439945 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21453833..21454146 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21484128..21484441 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21489277..21489590 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21494322..21494635 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21499367..21499680 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21519554..21519867 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21524397..21524710 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21529240..21529553 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21539127..21539440 | 330..17 | 820 | 84.1 | Minus |
| 2L | 23513712 | 2L | 21458896..21459209 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21463956..21464269 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21468999..21469312 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21474042..21474355 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21479085..21479398 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21504420..21504733 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21509465..21509778 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21514509..21514822 | 330..17 | 805 | 83.8 | Minus |
| 2L | 23513712 | 2L | 21534083..21534396 | 330..17 | 805 | 83.8 | Minus |
| 3R | 32079331 | 3R | 14626292..14626425 | 195..328 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:33:28 has no hits.
BS23386.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:03 Download gff for
BS23386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His4r-RB | 141..454 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:53 Download gff for
BS23386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His4r-RB | 155..468 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:08 Download gff for
BS23386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His4r-RB | 155..468 | 17..332 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:08 Download gff for
BS23386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14626050..14626229 | 17..196 | 100 | -> | Plus |
| 3R | 14626294..14626427 | 197..332 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:53 Download gff for
BS23386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10451772..10451951 | 17..196 | 100 | -> | Plus |
| arm_3R | 10452016..10452149 | 197..332 | 98 | | Plus |
BS23386.pep Sequence
Translation from 16 to 327
> BS23386.pep
MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYG
FGG*
BS23386.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His4r-PD | 103 | CG3379-PD | 1..103 | 1..103 | 524 | 100 | Plus |
| His4r-PC | 103 | CG3379-PC | 1..103 | 1..103 | 524 | 100 | Plus |
| His4r-PB | 103 | CG3379-PB | 1..103 | 1..103 | 524 | 100 | Plus |
| His4r-PA | 103 | CG3379-PA | 1..103 | 1..103 | 524 | 100 | Plus |
| His4:CG33909-PA | 103 | CG33909-PA | 1..103 | 1..103 | 524 | 100 | Plus |
