Clone BS23394 Report

Search the DGRC for BS23394

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:233
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG14823-RB
Protein status:BS23394.pep: full length peptide match
Sequenced Size:383

Clone Sequence Records

BS23394.complete Sequence

383 bp assembled on 2011-01-25

GenBank Submission: KX805504

> BS23394.complete
GAAGTTATCAGTCGACATGGAGCCCACATGCAGCAGCAGTGTGGCGGAAT
TGGCCAAATACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTG
GAGCATCAGGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAA
GCGGAAACGATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTA
CGGGCGCCATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATG
CACTTAAGACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGA
TCGGGGGCAAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTG
CGGGAGTGGCTGACTGAAAGCTTTCTAGACCAT

BS23394.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RB 351 CG14823-PB 1..351 17..367 1755 100 Plus
CG14823-RD 390 CG14823-PD 1..347 17..363 1720 99.7 Plus
CG14823-RA 792 CG14823-PA 1..343 17..359 1715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-RB 974 CG14823-RB 66..421 12..367 1765 99.7 Plus
CG14823-RD 1108 CG14823-RD 66..417 12..363 1730 99.4 Plus
CG14823-RA 2098 CG14823-RA 66..413 12..359 1725 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7066379..7066730 12..363 1730 99.4 Plus
Blast to na_te.dros performed on 2014-11-26 16:33:23 has no hits.

BS23394.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:02 Download gff for BS23394.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RB 71..420 17..366 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:59:50 Download gff for BS23394.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RB 71..420 17..366 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:06 Download gff for BS23394.complete
Subject Subject Range Query Range Percent Splice Strand
CG14823-RB 71..420 17..366 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:06 Download gff for BS23394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7066384..7066733 17..366 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:59:50 Download gff for BS23394.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7059484..7059833 17..366 99   Plus

BS23394.pep Sequence

Translation from 16 to 366

> BS23394.pep
MEPTCSSSVAELAKYSEDDVETDESKVVEHQEYAEALSMSGESRKRKRWT
RRSCCTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVE
VLEEDFPMVTAAGVAD*

BS23394.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14823-PB 116 CG14823-PB 1..116 1..116 592 100 Plus
CG14823-PD 129 CG14823-PD 1..116 1..116 584 98.3 Plus
CG14823-PA 263 CG14823-PA 1..114 1..114 582 100 Plus