BS23414.complete Sequence
1217 bp assembled on 2011-01-25
GenBank Submission: KX802241
> BS23414.complete
GAAGTTATCAGTCGACATGCTCCTTACCACCGGATCCTATATTGACCTGC
CCACCGAAATGTTTCTCAGCCTAAGAGAATCGCCAAACAGCAAGCACAAG
TGCATGGAGTTCCAGTCGCCATTCCCCCCCCGCAACTGTGGTTGGCATAC
GAACAGTTTGATCTTGAAACTGGCTTATGGAGCCTACATTTCACAGCCCG
GACAAGCCAAGTGGCTGGATTTCAATATAAATGGAGCAGTCAAGGAGGTG
CCAGATGAGCCTGCCTGTGATAAGTCATCCATCGATCTGCAGATGGTCTA
CAAGCCTCGCGCAATCGATCAGCAACCATCAGACATTGAAGATGGCAACT
GCAATAGCGCCTTGGTTAGTTGGACCCTTAGATGTAAAGGCGAAGGCGAT
GATTGCAACGATTTTCAAATCTTTAGCACACTATCCATACCAGCAGTTAA
GGATTCCAGCGGCAAGGAACCACTTGGATGCCACTTCATTAAGCTGGAGA
ACAAGCCAGACTGCGGTTGCGAAATAATGTCCAAATACGAGTTGATAAGC
GCCTGGGTGCAGTTAAAGCTAATGCGGGCAGAGATGGGACACTGCACACG
CATCTCGCTACGGGATTTTGAGCCAATGCTGGAGGAGAAGCTGACGTTAA
TTTCGCTGGAGCAGCAGCTTCATGACTATTATAACACAAGTATGCCGCAG
CTACTGTCCAACTTGTGTGAGTTTTTGAAGCTGCTGGACACGGTACCCGC
TGGAGATTACCTGCTGCGATACTCACCCAAGTACAAGGATAAGTTCCTGC
TGTGCATTGTCACCAAGGAGGCCACGCCACAGAGTTTTCAGCTACACCAG
CTCCTCACGGAATCCATCCCCAGCGACCAAGCCTTCCTTACGCAAAGCAG
CTACCTTCCGATCTCGCCCACTCTTTGTGGCCGCCTGCACGAGGAGCTCC
ATCTACTGCCCTGTGCATTTCCAGCAAAAGCCAACGGTCGCTCTGTCCAG
CGTCGAAAGGTGGTGGTGCCCATACCAGAGCCCTCCAGACAAGCTCCAGT
AAGACGGCAACGTTTAAAAAAGTGGAGCGAAGCCCAAACTCGAGAATTTC
GACGTCGATGTAAGGTGGATCAAAAGAAAAGAGCTCGGGCTCGCAAGACA
GCAGCGGCCAACAAAGAAAAAATAGAGCTGGAGAAGATTATGACGTTGTA
AAAGCTTTCTAGACCAT
BS23414.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ice2-RC | 1185 | CG10825-PC | 1..1185 | 17..1201 | 5925 | 100 | Plus |
Ice2-RA | 2055 | CG10825-PA | 871..2055 | 17..1201 | 5925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ice2-RC | 2350 | CG10825-RC | 944..2130 | 17..1203 | 5935 | 100 | Plus |
Ice2-RA | 2505 | CG10825-RA | 1099..2285 | 17..1203 | 5935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21131314..21132500 | 17..1203 | 5935 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:34:13 has no hits.
BS23414.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:09 Download gff for
BS23414.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10825-RC | 941..2123 | 17..1199 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:12 Download gff for
BS23414.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ice2-RB | 1017..2199 | 17..1199 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:35 Download gff for
BS23414.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ice2-RA | 1099..2281 | 17..1199 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:35 Download gff for
BS23414.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21131314..21132496 | 17..1199 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:12 Download gff for
BS23414.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16957036..16958218 | 17..1199 | 100 | | Plus |
BS23414.pep Sequence
Translation from 16 to 1200
> BS23414.pep
MLLTTGSYIDLPTEMFLSLRESPNSKHKCMEFQSPFPPRNCGWHTNSLIL
KLAYGAYISQPGQAKWLDFNINGAVKEVPDEPACDKSSIDLQMVYKPRAI
DQQPSDIEDGNCNSALVSWTLRCKGEGDDCNDFQIFSTLSIPAVKDSSGK
EPLGCHFIKLENKPDCGCEIMSKYELISAWVQLKLMRAEMGHCTRISLRD
FEPMLEEKLTLISLEQQLHDYYNTSMPQLLSNLCEFLKLLDTVPAGDYLL
RYSPKYKDKFLLCIVTKEATPQSFQLHQLLTESIPSDQAFLTQSSYLPIS
PTLCGRLHEELHLLPCAFPAKANGRSVQRRKVVVPIPEPSRQAPVRRQRL
KKWSEAQTREFRRRCKVDQKKRARARKTAAANKEKIELEKIMTL*
BS23414.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ice2-PC | 394 | CG10825-PC | 1..394 | 1..394 | 2086 | 100 | Plus |
Ice2-PA | 684 | CG10825-PA | 291..684 | 1..394 | 2086 | 100 | Plus |