Clone BS23414 Report

Search the DGRC for BS23414

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:234
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptIce2-RC
Protein status:BS23414.pep: full length peptide match
Sequenced Size:1217

Clone Sequence Records

BS23414.complete Sequence

1217 bp assembled on 2011-01-25

GenBank Submission: KX802241

> BS23414.complete
GAAGTTATCAGTCGACATGCTCCTTACCACCGGATCCTATATTGACCTGC
CCACCGAAATGTTTCTCAGCCTAAGAGAATCGCCAAACAGCAAGCACAAG
TGCATGGAGTTCCAGTCGCCATTCCCCCCCCGCAACTGTGGTTGGCATAC
GAACAGTTTGATCTTGAAACTGGCTTATGGAGCCTACATTTCACAGCCCG
GACAAGCCAAGTGGCTGGATTTCAATATAAATGGAGCAGTCAAGGAGGTG
CCAGATGAGCCTGCCTGTGATAAGTCATCCATCGATCTGCAGATGGTCTA
CAAGCCTCGCGCAATCGATCAGCAACCATCAGACATTGAAGATGGCAACT
GCAATAGCGCCTTGGTTAGTTGGACCCTTAGATGTAAAGGCGAAGGCGAT
GATTGCAACGATTTTCAAATCTTTAGCACACTATCCATACCAGCAGTTAA
GGATTCCAGCGGCAAGGAACCACTTGGATGCCACTTCATTAAGCTGGAGA
ACAAGCCAGACTGCGGTTGCGAAATAATGTCCAAATACGAGTTGATAAGC
GCCTGGGTGCAGTTAAAGCTAATGCGGGCAGAGATGGGACACTGCACACG
CATCTCGCTACGGGATTTTGAGCCAATGCTGGAGGAGAAGCTGACGTTAA
TTTCGCTGGAGCAGCAGCTTCATGACTATTATAACACAAGTATGCCGCAG
CTACTGTCCAACTTGTGTGAGTTTTTGAAGCTGCTGGACACGGTACCCGC
TGGAGATTACCTGCTGCGATACTCACCCAAGTACAAGGATAAGTTCCTGC
TGTGCATTGTCACCAAGGAGGCCACGCCACAGAGTTTTCAGCTACACCAG
CTCCTCACGGAATCCATCCCCAGCGACCAAGCCTTCCTTACGCAAAGCAG
CTACCTTCCGATCTCGCCCACTCTTTGTGGCCGCCTGCACGAGGAGCTCC
ATCTACTGCCCTGTGCATTTCCAGCAAAAGCCAACGGTCGCTCTGTCCAG
CGTCGAAAGGTGGTGGTGCCCATACCAGAGCCCTCCAGACAAGCTCCAGT
AAGACGGCAACGTTTAAAAAAGTGGAGCGAAGCCCAAACTCGAGAATTTC
GACGTCGATGTAAGGTGGATCAAAAGAAAAGAGCTCGGGCTCGCAAGACA
GCAGCGGCCAACAAAGAAAAAATAGAGCTGGAGAAGATTATGACGTTGTA
AAAGCTTTCTAGACCAT

BS23414.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
Ice2-RC 1185 CG10825-PC 1..1185 17..1201 5925 100 Plus
Ice2-RA 2055 CG10825-PA 871..2055 17..1201 5925 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
Ice2-RC 2350 CG10825-RC 944..2130 17..1203 5935 100 Plus
Ice2-RA 2505 CG10825-RA 1099..2285 17..1203 5935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21131314..21132500 17..1203 5935 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:34:13 has no hits.

BS23414.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:09 Download gff for BS23414.complete
Subject Subject Range Query Range Percent Splice Strand
CG10825-RC 941..2123 17..1199 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:12 Download gff for BS23414.complete
Subject Subject Range Query Range Percent Splice Strand
Ice2-RB 1017..2199 17..1199 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:35 Download gff for BS23414.complete
Subject Subject Range Query Range Percent Splice Strand
Ice2-RA 1099..2281 17..1199 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:35 Download gff for BS23414.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21131314..21132496 17..1199 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:12 Download gff for BS23414.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16957036..16958218 17..1199 100   Plus

BS23414.pep Sequence

Translation from 16 to 1200

> BS23414.pep
MLLTTGSYIDLPTEMFLSLRESPNSKHKCMEFQSPFPPRNCGWHTNSLIL
KLAYGAYISQPGQAKWLDFNINGAVKEVPDEPACDKSSIDLQMVYKPRAI
DQQPSDIEDGNCNSALVSWTLRCKGEGDDCNDFQIFSTLSIPAVKDSSGK
EPLGCHFIKLENKPDCGCEIMSKYELISAWVQLKLMRAEMGHCTRISLRD
FEPMLEEKLTLISLEQQLHDYYNTSMPQLLSNLCEFLKLLDTVPAGDYLL
RYSPKYKDKFLLCIVTKEATPQSFQLHQLLTESIPSDQAFLTQSSYLPIS
PTLCGRLHEELHLLPCAFPAKANGRSVQRRKVVVPIPEPSRQAPVRRQRL
KKWSEAQTREFRRRCKVDQKKRARARKTAAANKEKIELEKIMTL*

BS23414.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:44
Subject Length Description Subject Range Query Range Score Percent Strand
Ice2-PC 394 CG10825-PC 1..394 1..394 2086 100 Plus
Ice2-PA 684 CG10825-PA 291..684 1..394 2086 100 Plus