BS23446.complete Sequence
935 bp assembled on 2011-01-25
GenBank Submission: KX801132
> BS23446.complete
GAAGTTATCAGTCGACATGTCCACCGGCCGCCGTTTGGCCAAGCGCTCCA
TCATCGGCACCAAGGTGTGCGCCAAGGGTCCGGATGGCCTCTGGTACTCC
GGCACCATATCCGACGTGAAAACGCCGCCCTCGTACAGCGGACCGCTCTC
GCCGCCGCCGCCGCCCACTTTTGTGGTGCCCGGCGAGGCACCGATTAATG
CCGATACGCGCTACCTGGTCCGTTTCGATTTCAAGACCGCCGTCGAGTCC
CCAACCGCTACCACGTCGTCCGCGGCCTCGACCTCGTCCACATCCTCCAC
AGATCCGTCGGTCATCGTGGAAACGCGTCGCGCTGCCAACGTACACATCA
GTCCCGCTCAGGCACTGCGTCGCAGCGCCATGATCAAGGAGTTCCGCGAG
TCGGATCTTATTGGACCCGGATTCCGGTCCATCATGGACACCGAACTGCA
GCCTGGCCAGCGGGTCTACTTCACCTACAATGGACGCGAGCAGAGCGGCG
ATGTCGTCAAACACGACGCTACCAAGGATGAGGTGATTGTCAAGATCACA
ACAGTTGGAAATGAGGAACCCATTGAGCTGAAGAAGCGACTGGAGGAAGT
GCGTCTGCTGGAATCGCGACGCTCCGCCCGTCTGGCAGACCAGGATCGCG
ACACGGACTTTGCCAGACTCGCCGACATGAGTGGCGAACGCCGCAGAACC
ACCACACACAGTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTC
CCGGAAACGTCCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAA
CATGCCGTGCCGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCAT
GGCTGTAGGTCATCCTCCTTTTCCGACCCTGTCACACCCCCTTTTCGATC
ACGCCTACATATAAGCTAAAAGCTTTCTAGACCAT
BS23446.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RC | 903 | CG34360-PC | 1..903 | 17..919 | 4515 | 100 | Plus |
| Glut4EF-RH | 2226 | CG34360-PH | 1..838 | 17..854 | 4190 | 100 | Plus |
| Glut4EF-RG | 2853 | CG34360-PG | 1..838 | 17..854 | 4190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RC | 3418 | CG34360-RC | 995..1897 | 17..919 | 4515 | 100 | Plus |
| Glut4EF-RH | 10796 | CG34360-RH | 995..1832 | 17..854 | 4190 | 100 | Plus |
| Glut4EF-RG | 4308 | CG34360-RG | 995..1832 | 17..854 | 4190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9875675..9876224 | 17..566 | 2750 | 100 | Plus |
| 3R | 32079331 | 3R | 9930362..9930545 | 564..747 | 920 | 100 | Plus |
| 3R | 32079331 | 3R | 9943481..9943652 | 748..919 | 860 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:34:04 has no hits.
BS23446.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:08 Download gff for
BS23446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34360-RC | 995..1895 | 17..917 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:08 Download gff for
BS23446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RC | 995..1895 | 17..917 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:29 Download gff for
BS23446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RC | 995..1895 | 17..917 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:29 Download gff for
BS23446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9875675..9876223 | 17..565 | 100 | -> | Plus |
| 3R | 9930364..9930545 | 566..747 | 100 | -> | Plus |
| 3R | 9943481..9943650 | 748..917 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:08 Download gff for
BS23446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5701397..5701945 | 17..565 | 100 | -> | Plus |
| arm_3R | 5756086..5756267 | 566..747 | 100 | -> | Plus |
| arm_3R | 5769203..5769372 | 748..917 | 100 | | Plus |
BS23446.pep Sequence
Translation from 16 to 918
> BS23446.pep
MSTGRRLAKRSIIGTKVCAKGPDGLWYSGTISDVKTPPSYSGPLSPPPPP
TFVVPGEAPINADTRYLVRFDFKTAVESPTATTSSAASTSSTSSTDPSVI
VETRRAANVHISPAQALRRSAMIKEFRESDLIGPGFRSIMDTELQPGQRV
YFTYNGREQSGDVVKHDATKDEVIVKITTVGNEEPIELKKRLEEVRLLES
RRSARLADQDRDTDFARLADMSGERRRTTTHSIEVPSQLTAQHNSRKRPP
SDHQDYGNYLETCRAAEILSSMKLQSPHGCRSSSFSDPVTPPFRSRLHIS
*
BS23446.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-PC | 300 | CG34360-PC | 1..300 | 1..300 | 1541 | 100 | Plus |
| Glut4EF-PD | 361 | CG34360-PD | 1..288 | 1..288 | 1437 | 97.6 | Plus |
| Glut4EF-PH | 741 | CG34360-PH | 1..288 | 1..288 | 1437 | 97.6 | Plus |
| Glut4EF-PA | 741 | CG34360-PA | 1..288 | 1..288 | 1437 | 97.6 | Plus |
| Glut4EF-PG | 950 | CG34360-PG | 1..288 | 1..288 | 1437 | 97.6 | Plus |
