Clone BS23449 Report

Search the DGRC for BS23449

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:234
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG34137-RA
Protein status:BS23449.pep: full length peptide match
Sequenced Size:774

Clone Sequence Records

BS23449.complete Sequence

774 bp assembled on 2011-01-25

GenBank Submission: KX803987

> BS23449.complete
GAAGTTATCAGTCGACATGTCAGCATTCACCTGCACACAGTACCTAAACC
TCAATTCGAAGGACGTTTCGTCAATGTCCACCACCGTTACATTAAACGCA
GCCTGCTTTGGGCGGCAGGACTTGAACCTATTTATTGAGAGTCTAGAAAC
CATATCTCGCCTGGAAAGGGAGAGACACGAGCGACGCCAGCTTCGGCGCG
AGCAAAGACTACACCAGGCGCGAATTACTGAGTTGGCGGACGAACGATGC
TCCAGTCCGACACCCACAGCCGAGGAAGCCGTAGACGAGCCGCTCTTATA
TCTGGAGGCCAAGTGCATACCGTATGCGGTTTCTGGCCATATTTTTGCAC
AGGGCGACAACACACCTTGTCCCGAATACCATATGTGTGACGACGAAGCG
TACGGAAGTGCTTCGTATTCAGCACGCAGCAGCGTCACCTACTGTAGCTG
TGGCGGAATCTCCAATCTGGATTCAGACAGCGGAGAATCCGAAGGGAAGA
TGAAACCGTTTGTGCATCCGAGCTCCCAGGCCAAACCAAAGAATAGGTAT
TCTTCAACGCGATCCCGCATAATTAACTTGATGTTAAAGAGAAATAGGGC
TAAGCCCGCTCTCATCGAGCATCTGCAGCGACAGGGACACGGTGACACGT
TATCCAGCGAGAACATCAGTCACCAGTTCCCACGGCTTACTTCTAGCCAA
AAAAGGTCGGCTGAGCATAGTTTTCTGGATAAGGCCCTTCGATATCTTAC
ATTATAAAAGCTTTCCTAGACCAT

BS23449.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RB 741 CG34137-PB 1..741 17..757 3705 100 Plus
CG34137-RA 741 CG34137-PA 1..741 17..757 3705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RB 887 CG34137-RB 73..813 17..757 3705 100 Plus
CG34137-RA 892 CG34137-RA 78..818 17..757 3705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22151826..22152566 17..757 3705 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:34:18 has no hits.

BS23449.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:10 Download gff for BS23449.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RB 72..810 17..755 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:14 Download gff for BS23449.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..816 17..755 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:36 Download gff for BS23449.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..816 17..755 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:36 Download gff for BS23449.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22151826..22152564 17..755 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:14 Download gff for BS23449.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22151826..22152564 17..755 100   Plus

BS23449.pep Sequence

Translation from 16 to 756

> BS23449.pep
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTL*

BS23449.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-PB 246 CG34137-PB 1..246 1..246 1277 100 Plus
CG34137-PA 246 CG34137-PA 1..246 1..246 1277 100 Plus