BS23458.complete Sequence
776 bp assembled on 2011-02-04
GenBank Submission: KX803531
> BS23458.complete
GAAGTTATCAGTCGACATGGAACGTTGGCATAACTGCGTAGCAGTGGTGA
CCGGAGCCAGTTCGGGAATCGGAGCGGCAATCACCCGAAAACTGATCTCC
GCTGGCGTCATGGTGGTTGCCCTGGCCCGTCGAATGGACCGCTTGGAGCA
ATTGCGTGAGGAGCTGCCGCAGGATCGGCGATCGCGATTGCGTATAATGC
AGTGCGATGTTTCGGATGTGTCATCCGTAAACGCGGTCTTTGACGCGGTG
CAGGGGGATCTGGGCAACGTGGACATTCTTATCAATAACGCCGGAAAGCT
GTCCGGTGGACAGCTGCTGACTATGTCGGTAGACACTGTGCAGCAGATGC
TGCAGACGAATGTAATGGGCGTGGTCTACTGCACCCAGCGCGCCTTTGAA
TCGATGCGGCAGCGCCAGTCCAAGGGTCATGTGGTGCTCATTAACAGCAT
TGTGGGTCACTACATCTTTAATCCCCTGCCTGGAAGTCAGCAGGAACTCA
ACATGTACCCGGCCACCAAGCACGCGATCACCGCTCTTACCGAGCTCTTT
CGCCAGGAGATGCGAGATTTCAAGACCAAAGTCAAGGTCACGAGCATTAG
TCCGGGATTGGTGGACACTGAGTTAGTGCCGTTGGACTACAAAGGGCTGC
CTATGCTACAGGCGGAGGATGTGGCAAATGCCATCATGTATGTTCTGTCG
ACGCCTCCACATGTCCAGGTGCACGAGCTGACCATCAAGCCCTTGGGTGA
ACCCTTTTAGAAGCTTTCTAGACCAT
BS23458.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:16:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40485-RB | 744 | CG40485-PB | 1..744 | 17..760 | 3720 | 100 | Plus |
| CG40485-RA | 696 | CG40485-PA | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:16:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40485-RB | 1449 | CG40485-RB | 21..765 | 16..760 | 3725 | 100 | Plus |
| CG40485-RA | 1192 | CG40485-RA | 21..597 | 16..592 | 2885 | 100 | Plus |
| CG40485-RA | 1192 | CG40485-RA | 900..1068 | 592..760 | 845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:16:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22961764..22962340 | 592..16 | 2885 | 100 | Minus |
| X | 23542271 | X | 22961293..22961461 | 760..592 | 845 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:16:09 has no hits.
BS23458.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:52 Download gff for
BS23458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40485-RB | 22..765 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:42 Download gff for
BS23458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40485-RB | 22..765 | 17..760 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:22:10 Download gff for
BS23458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40485-RB | 22..765 | 17..760 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:22:10 Download gff for
BS23458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22961293..22961460 | 593..760 | 100 | <- | Minus |
| X | 22961764..22962339 | 17..592 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:42 Download gff for
BS23458.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22363129..22363296 | 593..760 | 100 | <- | Minus |
| arm_X | 22363600..22364175 | 17..592 | 100 | | Minus |
BS23458.pep Sequence
Translation from 16 to 759
> BS23458.pep
MERWHNCVAVVTGASSGIGAAITRKLISAGVMVVALARRMDRLEQLREEL
PQDRRSRLRIMQCDVSDVSSVNAVFDAVQGDLGNVDILINNAGKLSGGQL
LTMSVDTVQQMLQTNVMGVVYCTQRAFESMRQRQSKGHVVLINSIVGHYI
FNPLPGSQQELNMYPATKHAITALTELFRQEMRDFKTKVKVTSISPGLVD
TELVPLDYKGLPMLQAEDVANAIMYVLSTPPHVQVHELTIKPLGEPF*
BS23458.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40485-PB | 247 | CG40485-PB | 1..247 | 1..247 | 1248 | 100 | Plus |
| CG40485-PA | 231 | CG40485-PA | 1..192 | 1..192 | 964 | 100 | Plus |
| CG40486-PC | 247 | CG40486-PC | 1..247 | 1..247 | 798 | 61.1 | Plus |
| CG40486-PB | 247 | CG40486-PB | 1..247 | 1..247 | 798 | 61.1 | Plus |
| antdh-PA | 250 | CG1386-PA | 1..248 | 1..245 | 697 | 54.4 | Plus |
