BS23485.complete Sequence
995 bp assembled on 2011-01-25
GenBank Submission: KX804315
> BS23485.complete
GAAGTTATCAGTCGACATGTTGCCGAAATTAAAAACCGGTGGAGGGTTCT
TCTCCTATTTTAAGACTGAAAAGGGCCGAAAACTCGTATTCTACGCGGCG
GGAGCCACCACAGTGGGCCTCTTTCTTGGAAACTTCCTGCCGCACACATT
CGGCCTGAAATATTACCGCGATTTCGTGCAATGCTACCAACACGGCGTGG
GGCGTCCAGTGCCGGAGGCAGTGCAGCAGCGCCTGGAAAAGGCATTGGAT
CAGCTGGGCGTGACGCCCTTTGAGCGAAAGTTTGTGAAGCCCTTCACCGT
CTTTGGATTCGATGTTTTCCAGGCGGGCACCACTAAGTTTCGATTTGGAG
GCGCTTTGGGCATACCGGTGAACTATGGATACGACAGTCTGGAGGAGATT
AAGCGGGCAGACATTCGGTTTAGAGACAAACAGATCAACTGGAGTTCTCC
CAGCGGAAAACTGCTAGAGGAAGCCATCGTTTTGAATGAGGATGAACAGA
TTTTCGGTCTTAGCAAGGCTGTTCTGCAGATGCAAACCCATCGGGTACTG
CTCAACTCCATCTTTCCCAGCGTCAGCTTTCTTATGGTTTACACCATGGG
TCACTACCTCAACCTGCGGCTAGATCTCTTCGCCCGCCATGGAAGCGTGC
GGTTTGTGCTCTACAGCATTCTGGGTCTGTTTGGCTTAGGGCTCTGGTCC
TTCATGAAAGACTACAATCAGGTCTCTACGGACGCAGAGATTGACCAGCG
ACTGGCCACGATGGGTCCCCAACTTGTGGCAGCTGGAGCTAGCTTTTACG
ACAAACATCTAAAGAAGAACATCGCGCTGAGGGAGCTGATTGGAAATGAC
GTTTACACTGCACTGGGCAACGAAAACTATATGATTCGGCAAAAGTCCAT
GCCGCTAACAGCACGAAAATCTTTCTTCCTGGAGAAGCTGGAGGAACTCA
AAAAGGCGCAACAGCCTGAAACAGAGTAAAAGCTTTCTAGACCAT
BS23485.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:34:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33506-RA | 963 | CG33506-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:34:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33506-RA | 1073 | CG33506-RA | 45..1008 | 17..980 | 4820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14857905..14858364 | 649..190 | 2300 | 100 | Minus |
2R | 25286936 | 2R | 14857512..14857845 | 980..647 | 1670 | 100 | Minus |
2R | 25286936 | 2R | 14858424..14858596 | 189..17 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:34:24 has no hits.
BS23485.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:11 Download gff for
BS23485.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33506-RA | 43..998 | 22..977 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:16 Download gff for
BS23485.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33506-RA | 50..1005 | 22..977 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:38 Download gff for
BS23485.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33506-RA | 50..1005 | 22..977 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:38 Download gff for
BS23485.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14857515..14857845 | 647..977 | 100 | <- | Minus |
2R | 14857908..14858364 | 190..646 | 100 | <- | Minus |
2R | 14858424..14858591 | 22..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:16 Download gff for
BS23485.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10745020..10745350 | 647..977 | 100 | <- | Minus |
arm_2R | 10745413..10745869 | 190..646 | 100 | <- | Minus |
arm_2R | 10745929..10746096 | 22..189 | 100 | | Minus |
BS23485.pep Sequence
Translation from 16 to 978
> BS23485.pep
MLPKLKTGGGFFSYFKTEKGRKLVFYAAGATTVGLFLGNFLPHTFGLKYY
RDFVQCYQHGVGRPVPEAVQQRLEKALDQLGVTPFERKFVKPFTVFGFDV
FQAGTTKFRFGGALGIPVNYGYDSLEEIKRADIRFRDKQINWSSPSGKLL
EEAIVLNEDEQIFGLSKAVLQMQTHRVLLNSIFPSVSFLMVYTMGHYLNL
RLDLFARHGSVRFVLYSILGLFGLGLWSFMKDYNQVSTDAEIDQRLATMG
PQLVAAGASFYDKHLKKNIALRELIGNDVYTALGNENYMIRQKSMPLTAR
KSFFLEKLEELKKAQQPETE*
BS23485.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:49:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33506-PA | 320 | CG33506-PA | 1..320 | 1..320 | 1657 | 100 | Plus |