BS23505.complete Sequence
1466 bp assembled on 2011-02-18
GenBank Submission: KX802321
> BS23505.complete
GAAGTTATCAGTCGACATGTATGAGTTTCCGCTGCTAAAAACCGATGGCC
TTCGCGGTGGCGTCGTCTACTATGATGGTCAGGTGGATGATGCCCGGATG
TGCGTCGCATTGGTGATGACCGCGGTGGCCCTGGGCGCCAATGTGGGCAA
CCACATGGAGGTGGTGGAGATTATGCCACAGGAGGGATGCTGCCGAGTTG
TTAGCGTTAAGGACAAGATCTCCTGCGAGCAGTTCTACATTCAGTCCAAG
GCCGTGATCAATGCCACAGGCTCCAGCACAGATGCCATCCGGCAGATGGA
CAAGGAGGGAACCGCACCCATTCTATTGCCCACTCTGGAAACCCAAGTAT
CCCTGCCCCGCTACTTTGGTTCCGGACATTACGGTTTGTTGAGTCCGGCT
CTGAAAAATGATGATCTCACTGTATATATGGTGCCGTTTGAGAACCACAT
GGTTCTAGGCAGTCGCGAAGTGGACCTCGATGAAGTGTCTAGCCGTGGAA
GTCCCACTCCCGATCCAGATGACGTGGATTGTCTGCTAGAAGCAGCCAAG
AAAAGGATGGATCCCTGCGTGGAGCTGGGGCGCTGTCACGTCCTTAGTGC
CTGGACGGCGATCAAGGCCAGTGTGAGCTGTCCAACCGACAAGGAAAATG
ATGATGACAAGCGTGGAACACCGATCAACAGCTATATGATCGAGGTTAGT
CCCGACGGTCTTATCACGCTGGCCGGCGGACGGTGGAGCAGTTACCGCGT
GATGGCAGCCGATGCCGTGGATTTGGCCATTAAATCTTGTGGACTATGCG
ACGATCATGTGACCTCCAGTTGGACACAGGACTTGAAGTTAGACGGAGCC
GAATCATGGTGTTGCATGCTGCCGCTAGAATTCGTGCAGGACTACGGTGT
GCCCATGGACGTGGCGCATCATATCTCCGATTCCTATGGGTACAATGGAC
ATGCACTGTTCTCTCAGGCTCCTGATCTGAAGAAGCGCCTCCATCCGAGC
TTCCCCTATATAGAGGCAGAGATTCAGTATGCCATGCGAAATGAGTACGC
CTGCACCCTTGTGGACATCATCGCACGACGGTTGCGCATAGCCTTCGTGG
ATGCGGCCGCCACGCTGCACATGCTGCCTAGAATTCTCAAGATCATGGCC
GGCGAGAATGGTTGGGATGAGGAAGAGCAAAAGGAGCAGATGGTGGCGGC
CCAGGAGTTTCTGGTGCGCCAAATGGGTCTGGGATCAATAGTCCAACCCA
GGAGCACCAGCAAGAGCAAGCCGAAAAAGAAGGGCTCCTCGGAGGGATGT
TGCTGCCGGGCGGCAGTTCGCAGGGGGGCCAGGAGCTACTCGATGGAAAT
ATCAAAGAAGATTTGCGTTCAACCCTTGGTCCAACATAGATCCATGTCTA
GCATGTTCTTGCCCCTTATGACGAGCTTAAGTTATGGACTCGGACGCTAA
AAGCTTTCTAGACCAT
BS23505.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:03:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-RD | 1881 | CG7311-PD | 447..1881 | 16..1450 | 7175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:03:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-RD | 2316 | CG7311-RD | 747..2181 | 16..1450 | 7175 | 100 | Plus |
| CG7311-RE | 2294 | CG7311-RE | 725..2159 | 16..1450 | 7175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:03:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13709014..13710448 | 16..1450 | 7175 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 11:03:48 has no hits.
BS23505.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:16 Download gff for
BS23505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RB | 726..2157 | 17..1448 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:23:30 Download gff for
BS23505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 726..2157 | 17..1448 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:37:54 Download gff for
BS23505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7311-RE | 726..2157 | 17..1448 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:37:54 Download gff for
BS23505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13709015..13710446 | 17..1448 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:23:30 Download gff for
BS23505.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13709015..13710446 | 17..1448 | 100 | | Plus |
BS23505.pep Sequence
Translation from 16 to 1449
> BS23505.pep
MYEFPLLKTDGLRGGVVYYDGQVDDARMCVALVMTAVALGANVGNHMEVV
EIMPQEGCCRVVSVKDKISCEQFYIQSKAVINATGSSTDAIRQMDKEGTA
PILLPTLETQVSLPRYFGSGHYGLLSPALKNDDLTVYMVPFENHMVLGSR
EVDLDEVSSRGSPTPDPDDVDCLLEAAKKRMDPCVELGRCHVLSAWTAIK
ASVSCPTDKENDDDKRGTPINSYMIEVSPDGLITLAGGRWSSYRVMAADA
VDLAIKSCGLCDDHVTSSWTQDLKLDGAESWCCMLPLEFVQDYGVPMDVA
HHISDSYGYNGHALFSQAPDLKKRLHPSFPYIEAEIQYAMRNEYACTLVD
IIARRLRIAFVDAAATLHMLPRILKIMAGENGWDEEEQKEQMVAAQEFLV
RQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRRGARSYSMEISKKIC
VQPLVQHRSMSSMFLPLMTSLSYGLGR*
BS23505.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7311-PD | 626 | CG7311-PD | 150..626 | 1..477 | 2504 | 100 | Plus |
| Gpo-1-PD | 724 | CG8256-PD | 198..599 | 4..404 | 754 | 39.7 | Plus |
| Gpo-1-PA | 724 | CG8256-PA | 198..599 | 4..404 | 754 | 39.7 | Plus |
| Gpo-1-PB | 724 | CG8256-PB | 198..599 | 4..404 | 754 | 39.7 | Plus |
| Gpo-1-PC | 724 | CG8256-PC | 198..599 | 4..404 | 754 | 39.7 | Plus |
