BS23508.complete Sequence
1322 bp assembled on 2011-02-07
GenBank Submission: KX805266
> BS23508.complete
GAAGTTATCAGTCGACATGTGGGCTCCTCTGCTCGCTTTCGTTATCCTTG
GGCTAAACTATGCAGCATCCTCGTTCGTGAACTGGGATAATGTATTTTAC
GAGCAGCAGGCGACGTATCTGCGTCCTGGTGAGCCCCACATCCAGGAAGG
ACAGACGCTGCTTAACATGCTGTACGTGAACAACCAGGTCCAGGTCTACT
GCCAGCCGCCAACAGCGTTCTCCATGTGGAATGTCTTCCAGAGCAACCGC
CTGCGCCTGCAGATAGCCGCTGGCGAAGATTACACTCAGTATAAAGGAGC
CACCGTGCGGGAAGTTCATCATGCGCATAGCCAGCTGGATGAGTGCCACG
AAGGAAAGCCCTTGGGGCATTCCGCAGCAGACGAGCCACGGATCGTTCCG
ATGGCCACGTATGAGCACTCCTGTTACGGCATCTACACATCCAAACCGTT
CGTCCTCACGCTTGAAGTGATCAGTTTCGACCTTGAGCGGGTAAGCCAGT
TCACCTTTGGCATCGTTTTATGGTTAAGCTGTCCGCTCCTGGCGGATTCG
CTGCTTTTCTTCTACTGCTCAGCTGCGGCCCTGGGCGCCCACCTGGCGGG
TTTGTTGGCGGTCGCAGCCACCCTAATGGCATCTGATGGCGAGCGGTACC
TGCGACTCGGAACGCTCAAGGTGAACTTCAAGCTGGTGCTAAACGAGCGG
CCCACCGTGATAACCTTGGCGCTGGTCAGTGGCGCCTGGTTGCTGAAGTC
CGCCTCCCAGCGCTGCAGCTTTTTGTGGCGGTGCACTCTGTTTCGCCGCC
TGCATCACCGCTTGCTGAAGGGCACCTCCTACTTGCTGATTCTCACTGCA
TCCGATCACAGGGGCTTTGGGATGACCTGCCTTATGCTGTTGATGCCCTG
GCCGGAACTTTTGACTGTAATACGCTGGCTCAAAACCCTATACGCTTGCT
ACAAAAGGGGCTCCGTTAAACCAATGGTCCAGGTGGAAATCGAGAATCAG
GACGTCCCTTATCAAGACTCATATCTTCGGATCGTGCGATCCGAATACGA
TAATCGTTCATCCGAAAGCAGTGGTTTTAGCAGGAGTTTTAGCCAAAACA
AACATAACATGGGCTTTTATCGCGAGCAGGAGGATCAGGATAATGCCTTA
ATCTATGAATCTAGACGACCTACCGAGCGGAACTGCTTCAACAGATGTCA
CCAGTGTACCCCGACTAGATCACCCCGTCCAGAACCCCATTTGACCTCCT
TATATCGCAATCTTCACTATTCAAACGCGAAAAGCAGCTCCACATTTATG
AGATAAAAGCTTTCTAGACCAT
BS23508.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:22:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14006-RB | 1290 | CG14006-PB | 1..1290 | 17..1306 | 6450 | 100 | Plus |
| CG14006-RA | 1290 | CG14006-PA | 1..1290 | 17..1306 | 6450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14006-RB | 2397 | CG14006-RB | 60..1351 | 17..1308 | 6460 | 100 | Plus |
| CG14006-RA | 1591 | CG14006-RA | 60..1351 | 17..1308 | 6460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:22:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5727461..5728752 | 1308..17 | 6460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:22:58 has no hits.
BS23508.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 15:00:21 Download gff for
BS23508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 60..1347 | 17..1304 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:13 Download gff for
BS23508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 60..1347 | 17..1304 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:21 Download gff for
BS23508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14006-RA | 60..1347 | 17..1304 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:21 Download gff for
BS23508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5727465..5728752 | 17..1304 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:13 Download gff for
BS23508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5727465..5728752 | 17..1304 | 100 | | Minus |
BS23508.pep Sequence
Translation from 16 to 1305
> BS23508.pep
MWAPLLAFVILGLNYAASSFVNWDNVFYEQQATYLRPGEPHIQEGQTLLN
MLYVNNQVQVYCQPPTAFSMWNVFQSNRLRLQIAAGEDYTQYKGATVREV
HHAHSQLDECHEGKPLGHSAADEPRIVPMATYEHSCYGIYTSKPFVLTLE
VISFDLERVSQFTFGIVLWLSCPLLADSLLFFYCSAAALGAHLAGLLAVA
ATLMASDGERYLRLGTLKVNFKLVLNERPTVITLALVSGAWLLKSASQRC
SFLWRCTLFRRLHHRLLKGTSYLLILTASDHRGFGMTCLMLLMPWPELLT
VIRWLKTLYACYKRGSVKPMVQVEIENQDVPYQDSYLRIVRSEYDNRSSE
SSGFSRSFSQNKHNMGFYREQEDQDNALIYESRRPTERNCFNRCHQCTPT
RSPRPEPHLTSLYRNLHYSNAKSSSTFMR*
BS23508.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14006-PB | 429 | CG14006-PB | 1..429 | 1..429 | 2282 | 100 | Plus |
| CG14006-PA | 429 | CG14006-PA | 1..429 | 1..429 | 2282 | 100 | Plus |
