BS23514.complete Sequence
815 bp assembled on 2011-02-07
GenBank Submission: KX805510
> BS23514.complete
GAAGTTATCAGTCGACATGGAGGGGAAAAAAAAACCGGCAAAACAGAACG
AAGTCAAAGAAAACGACAAGGAAAAAGGCATGGAAAAAGGCAAGGAAAAA
GGCAAGGAAAAAGGCAAGGAAAAGAAGACCAAAGAGCCAAACTTTAGATC
CTCTGAGGACCGTCCTCCAGTGCCCCAAAGTAAAGATACTACTCACGGGA
CCGAAGAAAGTCACCATGGTGACGGCGACTTCGGTGGTCCTGATGGCGAT
AGAGAAAAAGGCAAGAACCAGCCTGACGGGAAAAGCGGTATCGTAGATCA
AAACCAGGGAAAAGACAAGGACAAGGGCAAAGGTAAGGAGAAAGGCATGA
ATAAGAAGGGAAAGGGTAAAAAGAAACCGAAAGATAAGGATGAGGATAAG
AATACCAAGGACAACCGGAGTGAAAAGGACTGCCCCTGCGAGATTTGTTG
TCCGCCAAAAGAAGAGGACACTCCGCTGATCAAGGAGATGCGCCGGCGGG
ATCGAGAGCGCCAGGTGCGCGATTACCTCCGCCAAATGCGTCACCGGCAA
TACATGGAGTGCAAGGACCTCAAATACCCGAGCCCACACCATAAGTGTGA
TCCAATCCAGTGCAACAACCAGTTCTGTAGCAATCCACGTATGCAAACTC
ATTTCGCCAGAGTCCAGGCAGTGCGAAGCTTGCAGCAGATCCTGCAGAGA
AGAAATCGACAAGGCGATGTCAAAATCTCCAAGGATCTGGACTCACTTTT
AGCAAGGCTGTGCAATAGCCTGACAATAAGTGATGGTCACTGCAGATGAA
AGCTTTCTAGACCAT
BS23514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:11:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43755-RB | 2049 | CG43755-PB | 1273..2049 | 23..799 | 3870 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:11:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43755-RB | 2333 | CG43755-RB | 1412..2188 | 23..799 | 3870 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:11:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 327574..328350 | 799..23 | 3870 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:11:26 has no hits.
BS23514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 10:59:38 Download gff for
BS23514.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33992-RA | 164..944 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:47 Download gff for
BS23514.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43755-RB | 1407..2187 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:48 Download gff for
BS23514.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43755-RB | 1407..2187 | 17..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:48 Download gff for
BS23514.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 327575..328355 | 17..798 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:47 Download gff for
BS23514.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 327575..328355 | 17..798 | 99 | | Minus |
BS23514.pep Sequence
Translation from 16 to 798
> BS23514.pep
MEGKKKPAKQNEVKENDKEKGMEKGKEKGKEKGKEKKTKEPNFRSSEDRP
PVPQSKDTTHGTEESHHGDGDFGGPDGDREKGKNQPDGKSGIVDQNQGKD
KDKGKGKEKGMNKKGKGKKKPKDKDEDKNTKDNRSEKDCPCEICCPPKEE
DTPLIKEMRRRDRERQVRDYLRQMRHRQYMECKDLKYPSPHHKCDPIQCN
NQFCSNPRMQTHFARVQAVRSLQQILQRRNRQGDVKISKDLDSLLARLCN
SLTISDGHCR*
BS23514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43755-PB | 682 | CG43755-PB | 425..682 | 3..260 | 1411 | 99.6 | Plus |
CG31921-PA | 713 | CG31921-PA | 430..709 | 1..252 | 291 | 29.7 | Plus |
CG31797-PA | 868 | CG31797-PA | 587..862 | 9..252 | 262 | 29.1 | Plus |