Clone BS23514 Report

Search the DGRC for BS23514

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:235
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG33992-RA
Protein status:BS23514.pep: full length peptide match
Sequenced Size:815

Clone Sequence Records

BS23514.complete Sequence

815 bp assembled on 2011-02-07

GenBank Submission: KX805510

> BS23514.complete
GAAGTTATCAGTCGACATGGAGGGGAAAAAAAAACCGGCAAAACAGAACG
AAGTCAAAGAAAACGACAAGGAAAAAGGCATGGAAAAAGGCAAGGAAAAA
GGCAAGGAAAAAGGCAAGGAAAAGAAGACCAAAGAGCCAAACTTTAGATC
CTCTGAGGACCGTCCTCCAGTGCCCCAAAGTAAAGATACTACTCACGGGA
CCGAAGAAAGTCACCATGGTGACGGCGACTTCGGTGGTCCTGATGGCGAT
AGAGAAAAAGGCAAGAACCAGCCTGACGGGAAAAGCGGTATCGTAGATCA
AAACCAGGGAAAAGACAAGGACAAGGGCAAAGGTAAGGAGAAAGGCATGA
ATAAGAAGGGAAAGGGTAAAAAGAAACCGAAAGATAAGGATGAGGATAAG
AATACCAAGGACAACCGGAGTGAAAAGGACTGCCCCTGCGAGATTTGTTG
TCCGCCAAAAGAAGAGGACACTCCGCTGATCAAGGAGATGCGCCGGCGGG
ATCGAGAGCGCCAGGTGCGCGATTACCTCCGCCAAATGCGTCACCGGCAA
TACATGGAGTGCAAGGACCTCAAATACCCGAGCCCACACCATAAGTGTGA
TCCAATCCAGTGCAACAACCAGTTCTGTAGCAATCCACGTATGCAAACTC
ATTTCGCCAGAGTCCAGGCAGTGCGAAGCTTGCAGCAGATCCTGCAGAGA
AGAAATCGACAAGGCGATGTCAAAATCTCCAAGGATCTGGACTCACTTTT
AGCAAGGCTGTGCAATAGCCTGACAATAAGTGATGGTCACTGCAGATGAA
AGCTTTCTAGACCAT

BS23514.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-RB 2049 CG43755-PB 1273..2049 23..799 3870 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-RB 2333 CG43755-RB 1412..2188 23..799 3870 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 327574..328350 799..23 3870 99.9 Minus
Blast to na_te.dros performed on 2014-11-26 22:11:26 has no hits.

BS23514.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 10:59:38 Download gff for BS23514.complete
Subject Subject Range Query Range Percent Splice Strand
CG33992-RA 164..944 17..798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:49:47 Download gff for BS23514.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RB 1407..2187 17..798 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:48 Download gff for BS23514.complete
Subject Subject Range Query Range Percent Splice Strand
CG43755-RB 1407..2187 17..798 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:48 Download gff for BS23514.complete
Subject Subject Range Query Range Percent Splice Strand
2L 327575..328355 17..798 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:49:47 Download gff for BS23514.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 327575..328355 17..798 99   Minus

BS23514.pep Sequence

Translation from 16 to 798

> BS23514.pep
MEGKKKPAKQNEVKENDKEKGMEKGKEKGKEKGKEKKTKEPNFRSSEDRP
PVPQSKDTTHGTEESHHGDGDFGGPDGDREKGKNQPDGKSGIVDQNQGKD
KDKGKGKEKGMNKKGKGKKKPKDKDEDKNTKDNRSEKDCPCEICCPPKEE
DTPLIKEMRRRDRERQVRDYLRQMRHRQYMECKDLKYPSPHHKCDPIQCN
NQFCSNPRMQTHFARVQAVRSLQQILQRRNRQGDVKISKDLDSLLARLCN
SLTISDGHCR*

BS23514.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG43755-PB 682 CG43755-PB 425..682 3..260 1411 99.6 Plus
CG31921-PA 713 CG31921-PA 430..709 1..252 291 29.7 Plus
CG31797-PA 868 CG31797-PA 587..862 9..252 262 29.1 Plus