Clone BS23526 Report

Search the DGRC for BS23526

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:235
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG31845-RA
Protein status:BS23526.pep: full length peptide match
Sequenced Size:479

Clone Sequence Records

BS23526.complete Sequence

479 bp assembled on 2011-02-04

GenBank Submission: KX801722

> BS23526.complete
GAAGTTATCAGTCGACATGGAAGGGGGGCTTTGGGAAGCCCAGAACAGGA
GTAGGCAGCAACAGGGCGAAAAAAAAAAAACGGCCATCAATGGAGGCAGC
TCCTCTTGGTTGCAAGTGCAACGGCTCCTAGTTGGCGAGCTGGGGCATTT
CCCCGCCATCCCGTCTCTGTCGCTGTCCCAGTGTTTTTGTGTTTTTGCCA
TTCGGTCGCTTTTGGTTCGGTTCGCTGGTTCGACGTTTGGGCCCGCTCGG
TCCCGACGTGTTTTTTGTTGGGTGTCATACAAAAACATTTTGCCGCCAAA
CAGAATGGCTAAGGCAGCTCCTCCTGCTGCTCCTCCGGCTCCTGCTGCTG
CTGCTGCTGCTGCTGCCCAACCTGTCAACCGCCTTCCCCCTGGACTCGTC
CCACTCTCTGCTCCTTCTCCACCAGCGATGCAAACTTTGCGAATCACTTT
TTTGGTTGCATGAAAGCTTTCTAGACCAT

BS23526.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 01:14:24 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 01:14:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13777209..13777655 17..463 2235 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:14:23 has no hits.

BS23526.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:48 Download gff for BS23526.complete
Subject Subject Range Query Range Percent Splice Strand
CG31845-RA 15..460 17..462 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:21:31 Download gff for BS23526.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13777209..13777654 17..462 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:21:31 Download gff for BS23526.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13777209..13777654 17..462 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:48 Download gff for BS23526.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13777209..13777654 17..462 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:48 Download gff for BS23526.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13777209..13777654 17..462 100   Plus

BS23526.pep Sequence

Translation from 16 to 462

> BS23526.pep
MEGGLWEAQNRSRQQQGEKKKTAINGGSSSWLQVQRLLVGELGHFPAIPS
LSLSQCFCVFAIRSLLVRFAGSTFGPARSRRVFCWVSYKNILPPNRMAKA
APPAAPPAPAAAAAAAAQPVNRLPPGLVPLSAPSPPAMQTLRITFLVA*
Sequence BS23526.pep has no blast hits.