Clone BS23551 Report

Search the DGRC for BS23551

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:235
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG15767-RA
Protein status:BS23551.pep: full length peptide match
Sequenced Size:1145

Clone Sequence Records

BS23551.complete Sequence

1145 bp assembled on 2011-02-08

GenBank Submission: KX801642

> BS23551.complete
GAAGTTATCAGTCGACATGTTTGACCGGGGTCTGTTTCCCACCGGTGGTT
CAGCCGCTTCCAGAGTATCCACTTTCACAGAGCGCCACCACCGACGAGTA
CAACTGAGTCGCAACAAGTTGTACCTACAGCGCCTCAGTCGAGCCACCAG
TTTGGTGCACAAGCGACCGCCTCTGATGAACGTCAAGACACAGTCCGGAT
TCGATGTTCTGCACGAGGATGCTCGCATCTTTCTGGAGCGGACCAACGCG
AATGTGCGCCTGCTACTTAATCTGTCGAAGATAAAGCGAACCAAAGGCAC
CATTGACTTTGTGGAGGGTCCACCTCTAATCCCCCAATCGGCTCTTCCAC
AAATGCTGCAAAGGCTTGATCGTGTTCAGCGTCACAACCTTTGGCTGGGT
CTTCGCCTGATGAGGATCCATGAGCGGAAGCGTGAAGGCGACCAGCGGAA
ACGTGAAGGCGACCAGCAGAAGCGGATCAGTGAGCAGTCGCAATCGAGTA
ACTTAAGGTGTCCCAGTACGATAACCAATCGGTCTACTCTGGGTGAGAAT
GAGGTGTTTAACAAGTACATTGGCTGGGATCTGGACATGCCCGATGAATA
CTTCGAACTGATGCGACTGCTCCGTCCCAGGATTGTTCTGCACTTTGGCC
TGATGGACGGCAGGCCGTTGGGCCAAGTGGTTGTGCAGCTATATACTGAA
GCTGCGCCGCTGGTGGTGCTGCAGTTCGTCCGCACTTGCCTGGGTCAGAG
GTCGCATGAGTTCGCCGTACGCCGAATCTTTCCACGTCTGTGGGTGGAGG
GCTATCTCCTCAGCAGCTGCAAAAACAGCCTAGGCGAAGCATCCTCTTTA
AGCTATCGTGATCCCATGGAGTTCGATACGCGAGTGGTGAGTCACGCCCG
CTACGCGTTCGTCTTGTCCTGCGCCAAGGAGTACTGTGTCCACGGATTTC
CCGGCGGAGCCATCAACTTTAGCATCAGTTTCAAGCCTCTGCCGGTGGCC
AGGGGACAGCGCGTGGGCTTTGGTCGGGTGATACGCGGCGACAAGGTCAT
CGAGGCCATGGAAGCTCATGGGACCAAAAATGGGAAAATCAGCCGGCCAC
TGCTCATCACCCACTGCGAATTGCTATAGAAGCTTTCTAGACCAT

BS23551.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15767-RA 1113 CG15767-PA 1..1113 17..1129 5445 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15767-RA 1433 CG15767-RA 160..1272 17..1129 5445 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5789646..5790758 17..1129 5445 99.3 Plus
Blast to na_te.dros performed on 2014-11-26 22:26:19 has no hits.

BS23551.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-09 09:49:56 Download gff for BS23551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15767-RA 166..1272 23..1129 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:58:02 Download gff for BS23551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15767-RA 166..1272 23..1129 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:01:02 Download gff for BS23551.complete
Subject Subject Range Query Range Percent Splice Strand
CG15767-RA 166..1272 23..1129 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:01:02 Download gff for BS23551.complete
Subject Subject Range Query Range Percent Splice Strand
X 5789652..5790758 23..1129 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:58:02 Download gff for BS23551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5683685..5684791 23..1129 99   Plus

BS23551.pep Sequence

Translation from 16 to 1128

> BS23551.pep
MFDRGLFPTGGSAASRVSTFTERHHRRVQLSRNKLYLQRLSRATSLVHKR
PPLMNVKTQSGFDVLHEDARIFLERTNANVRLLLNLSKIKRTKGTIDFVE
GPPLIPQSALPQMLQRLDRVQRHNLWLGLRLMRIHERKREGDQRKREGDQ
QKRISEQSQSSNLRCPSTITNRSTLGENEVFNKYIGWDLDMPDEYFELMR
LLRPRIVLHFGLMDGRPLGQVVVQLYTEAAPLVVLQFVRTCLGQRSHEFA
VRRIFPRLWVEGYLLSSCKNSLGEASSLSYRDPMEFDTRVVSHARYAFVL
SCAKEYCVHGFPGGAINFSISFKPLPVARGQRVGFGRVIRGDKVIEAMEA
HGTKNGKISRPLLITHCELL*

BS23551.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:02:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15767-PA 370 CG15767-PA 1..370 1..370 1920 100 Plus
CG30350-PA 369 CG30350-PA 62..369 38..370 542 37.3 Plus
CG3492-PA 404 CG3492-PA 240..383 198..349 234 35.5 Plus
CG32236-PA 385 CG32236-PA 124..385 79..370 230 28.8 Plus