BS23554.complete Sequence
1100 bp assembled on 2011-02-07
GenBank Submission: KX802431
> BS23554.complete
GAAGTTATCAGTCGACATGGAACTGGAACGCGAACTGCCCACCGACGACG
CCTCCGTGGAGTTGGATGTGTCCGAACCATGGGGTGATGTGAGATCGTCA
GATAGCCAGCTTACCCTGAAGCAGAGTGAGAGCCAGGAGACGATAAGACC
ATTTGGGTATGAGTTAGCTGATCCATCCGAGCTTAGCTCCTACGACATTC
ACCTGGGTCTTCTAGTAGAGAAGGGTTTAATTGACATTAACTCATTGGAC
AAGCCCTCGAACGAGGACCTTACAGACTATCCGGACTATCCGGGTCTTTT
GTCCAGGTCGGCGGATCGTAGTGGAATTGCTGAGATAGTCAAAGAAATGC
GAAACGAATTCATGGACAAGCTGACCTCTAAGGCTAAGAGCTTCAAAGAA
ATCCTGATTAAGAAAGGCTTAATGGAGCCAAAGGACGAAAATCCTGCTAT
GCAGAAGAATGACTCTGAGAATAAAGCAAAGACCAAAGACGATTCTCAGA
TTCCAGATCGTAAGAACAAAGCGGGAAAACCTCTAGGAGAAGGCGACGTC
AGACGAAATGGTGAACTCGCCCTGCTCATCAATGAAATCAATCAGTTTAC
TTCTGGCATGGAGCAAGATCCGGACACTGCGGACTGGGCTCGGTTCCGGG
CCAACCTGCTGAAAATACATAAGTACTATGTGAGCGTCAATGAGCCGGAA
GGAAAAGGCCAAGAACGACCAAACAGCCAAATCGGCGCTGTCAGCGTTTT
AGAACCATCAGACATCAGCGGACCGAAGGAAGACCTCAGCAGTCGGGCCC
AGTACCTCCGTAAAAATCTCCGGGGTCTCGAATGCAAAATGCTTACCCTG
GACCACTCCGTTGATATCTTTAGCGACAAGTTCCATCGTAGTCTGGTCAC
TAAAGAGCATGTGGAGCGGGAAATGGTGTCGATTGCACTGGTGCGCGATA
AAATCGGACGACGCCTAAATCAGATGGAAGTGGAATTTCGCAGGGCCAAG
GAGGATTTATTTGATCGGGGCAGGAACCCAAAAAACCAAAGCTATATCGC
TTATTCAAAGAATAATCCTGATTGTGGAGCTTGAAAGCTTTCTAGACCAT
BS23554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:22:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32459-RA | 1068 | CG32459-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:22:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32459-RA | 1376 | CG32459-RA | 65..1132 | 17..1084 | 5340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:22:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22854827..22855500 | 1084..411 | 3370 | 100 | Minus |
3L | 28110227 | 3L | 22855792..22855995 | 220..17 | 1020 | 100 | Minus |
3L | 28110227 | 3L | 22855547..22855740 | 412..219 | 970 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:22:45 has no hits.
BS23554.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 14:54:54 Download gff for
BS23554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32459-RA | 65..1131 | 17..1083 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:06 Download gff for
BS23554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32459-RA | 65..1131 | 17..1083 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:16 Download gff for
BS23554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32459-RA | 65..1131 | 17..1083 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:16 Download gff for
BS23554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22855792..22855995 | 17..220 | 100 | | Minus |
3L | 22855547..22855738 | 221..412 | 100 | <- | Minus |
3L | 22854828..22855498 | 413..1083 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:06 Download gff for
BS23554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22847928..22848598 | 413..1083 | 100 | <- | Minus |
arm_3L | 22848647..22848838 | 221..412 | 100 | <- | Minus |
arm_3L | 22848892..22849095 | 17..220 | 100 | | Minus |
BS23554.pep Sequence
Translation from 16 to 1083
> BS23554.pep
MELERELPTDDASVELDVSEPWGDVRSSDSQLTLKQSESQETIRPFGYEL
ADPSELSSYDIHLGLLVEKGLIDINSLDKPSNEDLTDYPDYPGLLSRSAD
RSGIAEIVKEMRNEFMDKLTSKAKSFKEILIKKGLMEPKDENPAMQKNDS
ENKAKTKDDSQIPDRKNKAGKPLGEGDVRRNGELALLINEINQFTSGMEQ
DPDTADWARFRANLLKIHKYYVSVNEPEGKGQERPNSQIGAVSVLEPSDI
SGPKEDLSSRAQYLRKNLRGLECKMLTLDHSVDIFSDKFHRSLVTKEHVE
REMVSIALVRDKIGRRLNQMEVEFRRAKEDLFDRGRNPKNQSYIAYSKNN
PDCGA*
BS23554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:02:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32459-PA | 355 | CG32459-PA | 1..355 | 1..355 | 1824 | 100 | Plus |