BS23569.complete Sequence
1043 bp assembled on 2011-02-07
GenBank Submission: KX804327
> BS23569.complete
GAAGTTATCAGTCGACATGAATCAATTCGGCCAGCCAAAGCAAACGCAGC
AACAGGATTACGAACTACCCAATCCGCCAAATGACACCATATCAGCGCTG
GAGTTTTCACCGCGATCGAGTTCCTGGAACGCAATCTGTGCCGGAAGTTG
GGATAACACCGTGCGCATTTGGGAGGTGCAAGCGGACAGGCTGGTGCCCA
AGGTCATGAATTCGCTGGAGGGCACGCCATTCGATGTCACTTGGAACGAC
TCAGGCAACAAGGTATACCTGAGCGACTCCAGCGGCCAGGTGACTGAGTG
GGACTTAGAATCGAACCAGCTGAGAAAGGTGGGACTTCACGCAAGAGCTG
CACGCACCTGCCATTGGGTGGGCCCCTATTTGGCCACAACCTCATGGGAC
AAGTCCATTAGGTTCTGGGACCCGCGTGCTGCCATAGAACTCACCAGGAT
GGAGCTACCGGATCGTAGCTATGCCGCCGATGTGCTCAACGACGTGGCGG
TGGTGGCCTGCGGCGATCGGTCCATCCTGGCCTACACTCTGCGTGGCGGA
CCCGTGGAGCAGGGGCGCATGAAGAGTCCGGGCGAGAGCAACACCCAAGT
GCGATCGGTGGCGCTCCACCAGAATAGAGATCTGACCAGCTGGCTTATTG
CCAAGACGAATGGCATGGTGTTCGATCAGAGCATGGCTCATCGTACGGTC
AGTTTTCCAATCAGGTGCCATCGACGGGAGAATTCCGGCATCCTAGACGT
CTATGCGGTGAACGAAGTGAAGGTCAACATGGTGACGCAGCACATTGCCA
CGGTGGGATCGGATGGAGTGTTCTGCTTCTGGGACAGCCAGATGCGTTCC
AAGCTGCTGGAAAGCAAGGTTCATCCTCAGCCGATCACTAAGTGCGCCAT
CAGTGGCGATGGCAAGCTCTTTGCGTATGCTCTGGGCTACGATTGGTCCA
AGGGACACGAGTACTCGGATTCCAGCATAAAACCCCACATATTCCTGCGC
CCGTTTGAAACGAATGTTGCTGCCTAAAAGCTTTCTAGACCAT
BS23569.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12782-RA | 1011 | CG12782-PA | 1..1011 | 17..1027 | 5055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12782-RA | 1219 | CG12782-RA | 148..1160 | 16..1028 | 5065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:17:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23264328..23264944 | 1028..412 | 3085 | 100 | Minus |
| 2R | 25286936 | 2R | 23265000..23265396 | 412..16 | 1985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:17:59 has no hits.
BS23569.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 13:22:45 Download gff for
BS23569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12782-RA | 140..1148 | 17..1025 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:53:29 Download gff for
BS23569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12782-RA | 149..1157 | 17..1025 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:58 Download gff for
BS23569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12782-RA | 149..1157 | 17..1025 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:58 Download gff for
BS23569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23264331..23264943 | 413..1025 | 100 | <- | Minus |
| 2R | 23265000..23265395 | 17..412 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:53:29 Download gff for
BS23569.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19151854..19152466 | 413..1025 | 100 | <- | Minus |
| arm_2R | 19152523..19152918 | 17..412 | 100 | | Minus |
BS23569.pep Sequence
Translation from 16 to 1026
> BS23569.pep
MNQFGQPKQTQQQDYELPNPPNDTISALEFSPRSSSWNAICAGSWDNTVR
IWEVQADRLVPKVMNSLEGTPFDVTWNDSGNKVYLSDSSGQVTEWDLESN
QLRKVGLHARAARTCHWVGPYLATTSWDKSIRFWDPRAAIELTRMELPDR
SYAADVLNDVAVVACGDRSILAYTLRGGPVEQGRMKSPGESNTQVRSVAL
HQNRDLTSWLIAKTNGMVFDQSMAHRTVSFPIRCHRRENSGILDVYAVNE
VKVNMVTQHIATVGSDGVFCFWDSQMRSKLLESKVHPQPITKCAISGDGK
LFAYALGYDWSKGHEYSDSSIKPHIFLRPFETNVAA*
BS23569.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:03:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12782-PA | 336 | CG12782-PA | 1..336 | 1..336 | 1798 | 100 | Plus |
| Rae1-PA | 346 | CG9862-PA | 2..335 | 4..328 | 675 | 41.6 | Plus |
| Bub3-PB | 326 | CG7581-PB | 5..297 | 14..308 | 286 | 27.8 | Plus |
| Bub3-PA | 326 | CG7581-PA | 5..297 | 14..308 | 286 | 27.8 | Plus |
