Clone BS23573 Report

Search the DGRC for BS23573

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:235
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG15925-RA
Protein status:BS23573.pep: full length peptide match
Sequenced Size:1112

Clone Sequence Records

BS23573.complete Sequence

1112 bp assembled on 2011-02-18

GenBank Submission: KX804756

> BS23573.complete
GAAGTTATCAGTCGACATGACTCTGCTTTCGGGCGCCAACTCGGTGGGAT
ATCCCAGTCAAATGCCGGCGAAAAGGATCAGCTGGCGGCGTTTGGTGGCA
CTACTGCCGAATTCGATAGGTTTGTCATTAAAACCGGTGACGCCTCATTT
GAGGGACCTACATCTCGTCCAGCGCCGTCTCCAGGACGATTTTCTGGGCT
GTGAGGCTCTGTGGACAATTTTTATGGCCGCCGCCTGGAGTTATCGCTAC
AGAACGCGGCTGAGACCATTTCCCAGCCACTGGAATACCATAGATTTGGT
TTTTAATACGCTGGGTGATGCACCCAGACTGGAGGTGCTGCAGCAGCAGC
TCATGCACTGCGACTATCAGGCCTGCTCCCCCAATGTGGTTCGTTTGCTA
ACGGACATCCTGGTGGATCAGGCCGATCGCGTGTCCTTGAGCTCACTGCG
ACCCTGCGAGTTCCAGGAGCTGTACGCTCACCTGGGCATGTCGCCGCCCA
AGCAGCCACCCACCCAGATCTTTGAGGTGCGAACAGGCAAGGGCAATGAG
AAGGGGGAGGCATATGCCAGTTTGCGGCAAGAGAACAAGGAATCCGTTCG
CCTGGGCTTCTATGGCTGCAAGCTAGAGAAGGTTTATGCGCTTCTGAATT
CCCAAAATTCCCTGGACAATGGAAAGTATCTGGAGCTAACCTGCGATATC
AATGAAGCCCTGGCCAGGAGTAAGCCCCAGGCTGGCGTGGGTGGCTCCCG
TTGCGGATCGATACTGCGTTGCGTGGCTGTGGTAGAGTTCGTCTTCCAGG
ACAATGAAACCAGCCGCGATAAGAAGCAAGTGATCATCAAGGATGCGAAC
ACCATGCAGGTATCGTATCTACTATTGTACGGCCAAAGCTGCAATGAATA
CGCAATGGAGCGACAGATCAAGCTGATGGCGGAGCCAGCTCGAGAACTGC
TCAATTGGCTGGAAAGATACCACAAGAAGGCCATATCCTTGGGCGTTGGC
CTGCTGATCGTTTCATCGATGGCCCATTTCGGAAGCACTTTCTTTCGCCT
GTTGGCTCGCACTGGCTTCTACGTATTCAAGCGAGGTATTTTGTAAAAGC
TTTCTAGACCAT

BS23573.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG15925-RA 1080 CG15925-PA 1..1080 17..1096 5355 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15925-RA 1527 CG15925-RA 279..1367 9..1097 5370 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16446264..16447352 9..1097 5370 99.5 Plus
Blast to na_te.dros performed on 2014-11-26 15:29:19 has no hits.

BS23573.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:47 Download gff for BS23573.complete
Subject Subject Range Query Range Percent Splice Strand
CG15925-RA 287..1364 17..1094 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:40 Download gff for BS23573.complete
Subject Subject Range Query Range Percent Splice Strand
CG15925-RA 287..1364 17..1094 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:05 Download gff for BS23573.complete
Subject Subject Range Query Range Percent Splice Strand
CG15925-RA 287..1364 17..1094 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:05 Download gff for BS23573.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16446272..16447349 17..1094 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:40 Download gff for BS23573.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12333777..12334854 17..1094 99   Plus

BS23573.pep Sequence

Translation from 16 to 1095

> BS23573.pep
MTLLSGANSVGYPSQMPAKRISWRRLVALLPNSIGLSLKPVTPHLRDLHL
VQRRLQDDFLGCEALWTIFMAAAWSYRYRTRLRPFPSHWNTIDLVFNTLG
DAPRLEVLQQQLMHCDYQACSPNVVRLLTDILVDQADRVSLSSLRPCEFQ
ELYAHLGMSPPKQPPTQIFEVRTGKGNEKGEAYASLRQENKESVRLGFYG
CKLEKVYALLNSQNSLDNGKYLELTCDINEALARSKPQAGVGGSRCGSIL
RCVAVVEFVFQDNETSRDKKQVIIKDANTMQVSYLLLYGQSCNEYAMERQ
IKLMAEPARELLNWLERYHKKAISLGVGLLIVSSMAHFGSTFFRLLARTG
FYVFKRGIL*

BS23573.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15925-PA 359 CG15925-PA 1..359 1..359 1869 100 Plus