BS23576.complete Sequence
668 bp assembled on 2011-01-25
GenBank Submission: KX805830
> BS23576.complete
GAAGTTATCAGTCGACATGGCCTCACCTAGTCGGAGTTCCCAGCGATCCC
TGCTTAACGCAGGCCTCCAATTGTTTACCACAAAGCTGGGTAGGACCCAG
CACACGCTTCCGCTGAGTGATTTATCCTCGCTGCATGGTGTCGACCTACA
TCATCAGAATACTGTACCGACTGGGATGTCCCAGCAGCTGGCGGATGTCC
AGAAGCGCACCCAATTTCTTGAGGAGCGGAACCGCCAGCTCAGGAATCTG
GCGCTGGATAAATCTGACCTCTTCGAGTCACGAACTGCCATGCTGTGCTC
CCGAGCTTTCGACATCAGTCAGGAACTGTTCGTAACCAGGATGAGGATTA
ACGACGTGGAGAACGCCTGCACTGAACTTCGAAGTCGCATCCTGGACGTA
AAGCTGCGACGCATCCAGCGTCTCCGGCTCCTCTGCCACGAGATACAGAA
ACTGCAAGAAGCACTGGAACACCAGCTGCCCCCGATCCTGATGCACGTCT
GGCACAGACTTTGTTTCCTATGGAACTGTGTGGACTGCCTGGCGCTTGTG
TCCTGCGGGGCCCGTCCCGTCTTCGAGGCAGAGAGCAAAATGGATAAAAT
GGATGCCCTCAATCTCTTCGTGGCGGGCTTCTGAAAGCTTTCTAGACCAT
TCGTTGGGCGCTTAAGCG
BS23576.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14054-RA | 618 | CG14054-PA | 1..618 | 17..634 | 3090 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14054-RA | 920 | CG14054-RA | 122..739 | 17..634 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2065454..2065705 | 634..383 | 1260 | 100 | Minus |
| X | 23542271 | X | 2065944..2066089 | 251..106 | 730 | 100 | Minus |
| X | 23542271 | X | 2065758..2065892 | 384..250 | 675 | 100 | Minus |
| X | 23542271 | X | 2066149..2066238 | 106..17 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:35:05 has no hits.
BS23576.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:17 Download gff for
BS23576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14054-RA | 122..745 | 17..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:34 Download gff for
BS23576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14054-RA | 122..745 | 17..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:50 Download gff for
BS23576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14054-RA | 122..745 | 17..640 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:50 Download gff for
BS23576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2065448..2065703 | 385..640 | 98 | <- | Minus |
| X | 2065758..2065891 | 251..384 | 100 | <- | Minus |
| X | 2065945..2066088 | 107..250 | 100 | <- | Minus |
| X | 2066149..2066238 | 17..106 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:34 Download gff for
BS23576.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1959481..1959736 | 385..640 | 98 | <- | Minus |
| arm_X | 1959791..1959924 | 251..384 | 100 | <- | Minus |
| arm_X | 1959978..1960121 | 107..250 | 100 | <- | Minus |
| arm_X | 1960182..1960271 | 17..106 | 100 | | Minus |
BS23576.pep Sequence
Translation from 16 to 633
> BS23576.pep
MASPSRSSQRSLLNAGLQLFTTKLGRTQHTLPLSDLSSLHGVDLHHQNTV
PTGMSQQLADVQKRTQFLEERNRQLRNLALDKSDLFESRTAMLCSRAFDI
SQELFVTRMRINDVENACTELRSRILDVKLRRIQRLRLLCHEIQKLQEAL
EHQLPPILMHVWHRLCFLWNCVDCLALVSCGARPVFEAESKMDKMDALNL
FVAGF*
BS23576.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14054-PA | 205 | CG14054-PA | 1..205 | 1..205 | 1055 | 100 | Plus |
