BS23578.complete Sequence
1109 bp assembled on 2011-02-07
GenBank Submission: KX801669
> BS23578.complete
GAAGTTATCAGTCGACATGAGTTCGCATAAGATTAACCTGGAGAATGCCT
ACCAGAAGATGATAGAACAGAATATCAAAAGTCAGTTGGAGAAAAATGGA
ACCATGGCGGCACTACGGAGCGAAATGCACGTGAAGATCCTCCAGATGAT
ACGTGGCCAGCAGAATAAGTCCAAAGTCCAAGCACTCACTGGTGGATCCA
ATCAATCGGAGGATCACAGCCTGGTCAAGCTGATCAACCAGATGATTATG
GAGTTCCTCGATTGGTTCGGCTACAAGCACACCATGGAAACATTTCGCAT
GGAGACGGGTGAAAACGTGGCCAATCGCAGGGAGATGGAACAAAGTCTAC
ACATCACACCCGAGTCAAAGGATTTTCCGCTCCTGGCTCAACTAGTTATG
CGCGATTGGAAGTTCGGTGTGCAAAAAGGAGGTTCCAAAAAGTTGGTTCA
GCTACCGGATCCTATGGAGGCCACTGTGCAAAGGAGTCGAAAATTGGTAC
AGGAACTAAAAGTTATGAGAGCACAAAAATCAGAAGTTAACCAAGGCAGA
CTAGTTCAAAACAATCGAAAACTCATCACTAATAATACGTTCACGAAAGG
TCTCACACCCAAGAGCATTAGTACTCCACCTCGTTCGATCAAGAACGAGA
ATCCGAAGTCATACGTAGATAGTTCTGAATCCGATGTCCTGGAATCTGAT
TACAGCGAAGAAGAATCGGAGGACAGTGACGCATATAAGGACATACCCGA
TAGACAGATATTTATCGATGACTTGCCGCCAGAGGGAAAATATGCCCCAA
ATTATGGAGAAGAAGGTCCTTTTGAGGGTAAACAAAATCAGGCAAATGAA
CGCGACAATATTCCGAGCACATCGAGGAAGCAACATTTTTCAAGGAAGCC
AGAAACTGAAAGTTCCGACTCTGATGATAAGCCTTCGATCAGTGGAATAA
ATAAAGTTTCAAGGCAGGACTATTGGAATTCCCCGCGAGGAGTGCAACTA
CGGAACAAAAATACCTTAAAACCGGAGGAAGAATGTGATACCCACATAAG
AAAAGTCAATTTAGACAGCGATTACAGCTCGGATGAAGATTGAAAGCTTT
CTAGACCAT
BS23578.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5614-RA | 1077 | CG5614-PA | 1..1077 | 17..1093 | 5355 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5614-RA | 1288 | CG5614-RA | 105..1182 | 16..1093 | 5360 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:20:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15779909..15780986 | 16..1093 | 5360 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:20:46 has no hits.
BS23578.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:57 Download gff for
BS23578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5614-RA | 106..1181 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:34 Download gff for
BS23578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5614-RA | 106..1181 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:23:38 Download gff for
BS23578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5614-RA | 106..1181 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:23:38 Download gff for
BS23578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15779910..15780985 | 17..1092 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:34 Download gff for
BS23578.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11605632..11606707 | 17..1092 | 99 | | Plus |
BS23578.pep Sequence
Translation from 16 to 1092
> BS23578.pep
MSSHKINLENAYQKMIEQNIKSQLEKNGTMAALRSEMHVKILQMIRGQQN
KSKVQALTGGSNQSEDHSLVKLINQMIMEFLDWFGYKHTMETFRMETGEN
VANRREMEQSLHITPESKDFPLLAQLVMRDWKFGVQKGGSKKLVQLPDPM
EATVQRSRKLVQELKVMRAQKSEVNQGRLVQNNRKLITNNTFTKGLTPKS
ISTPPRSIKNENPKSYVDSSESDVLESDYSEEESEDSDAYKDIPDRQIFI
DDLPPEGKYAPNYGEEGPFEGKQNQANERDNIPSTSRKQHFSRKPETESS
DSDDKPSISGINKVSRQDYWNSPRGVQLRNKNTLKPEEECDTHIRKVNLD
SDYSSDED*
BS23578.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5614-PA | 358 | CG5614-PA | 1..358 | 1..358 | 1855 | 100 | Plus |