BS23582.complete Sequence
500 bp assembled on 2011-01-25
GenBank Submission: KX802761
> BS23582.complete
GAAGTTATCAGTCGACATGCACAAGACCTGGAATAAGGCGTTCCACAAGC
GCAAGCTGTGGAGGAGCGTGTCCAAGCCCGGAAAGTTGGTGTACTACATG
CAGCCGCTAATCGAGCACTTGTTCGACACCTGGATGCAACCACTGCCCTT
TCCGACGCTCCTCAAGTTCATCTACAGCTGGGTGCTGATCTTCTTCATCA
TGATTCCGATGCTCTATCCGCTGCTCGTCCTCCTCTCCTACTACGGCATA
TTCCAGTACGCGGCGGAGGAGCACTTCGGACTGAAGACGCCCGAGAAGTG
GGACCTCCTGGGCGCCGCCGCCAGGCTGTGGCACTTCGAGGTGACCAACA
GGAAGTATCTCCTTCGACTATATGCGCATGGCTCTGTGGTTCGTCTTCAA
CTGAACCAACAGCCGGAGTCCTTCGATCCCTACTTGCGAATCCCGTTTGC
GGGGGAGTTGGCTTAGAAGCTTTCTAGACCATTCGTTGGGCCCTTAAAGG
BS23582.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11145-RA | 450 | CG11145-PA | 1..450 | 17..466 | 2220 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11145-RA | 574 | CG11145-RA | 41..490 | 17..466 | 2220 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7428151..7428456 | 363..58 | 1500 | 99.3 | Minus |
| 2R | 25286936 | 2R | 7427989..7428091 | 466..364 | 515 | 100 | Minus |
| 2R | 25286936 | 2R | 7428512..7428553 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:35:00 has no hits.
BS23582.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:16 Download gff for
BS23582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11145-RA | 41..499 | 17..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:32 Download gff for
BS23582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11145-RA | 41..499 | 17..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:49 Download gff for
BS23582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11145-RA | 41..499 | 17..475 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:49 Download gff for
BS23582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7427980..7428091 | 364..475 | 96 | <- | Minus |
| 2R | 7428151..7428455 | 59..363 | 99 | <- | Minus |
| 2R | 7428512..7428553 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:32 Download gff for
BS23582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3315485..3315596 | 364..475 | 96 | <- | Minus |
| arm_2R | 3315656..3315960 | 59..363 | 99 | <- | Minus |
| arm_2R | 3316017..3316058 | 17..58 | 100 | | Minus |
BS23582.pep Sequence
Translation from 16 to 465
> BS23582.pep
MHKTWNKAFHKRKLWRSVSKPGKLVYYMQPLIEHLFDTWMQPLPFPTLLK
FIYSWVLIFFIMIPMLYPLLVLLSYYGIFQYAAEEHFGLKTPEKWDLLGA
AARLWHFEVTNRKYLLRLYAHGSVVRLQLNQQPESFDPYLRIPFAGELA*
BS23582.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11145-PA | 149 | CG11145-PA | 1..149 | 1..149 | 811 | 100 | Plus |
