BS23584.complete Sequence
896 bp assembled on 2011-03-18
GenBank Submission: KX800566
> BS23584.complete
GAAGTTATCAGTCGACATGGGAGAAGACAGTTCGAGGCGCCTCCCGCGCT
GGTGGTTTGGAGGGGTTTGCGCTGCAATCGCAGTCACCGGCACCCATCCG
ATTGATCTCATCAAGGTACAGCTGCAGACCCAATCCCAAGCGGACCGGAA
GACCGTGGGGGAGATCCTTAAAGGCATACACGAGCGGAGCGGAATCTTGG
GCTTTTACAATGGCATTTCGGCCTCCTGGTTTCGCCAGCTGACCTATACC
ACCACTCGCTTCGCCTTGTACGAGGCCGGTAAGGACTACGTCGACACGCA
AAAAGTTAGTTCCAAGATGGCCCTGGCCACCTTTGCGGGAATCGTCGGTG
GGATTGTGGGTGTACCCGGGGACGTGGTCACAGTGCGACTCCAGAACGAC
GTCAAGTTGCCGGAGGAGAAGCGACGTAACTACAAGCACGTTTTCGACGG
CCTTTTCCGCATCTACAAAGAGGAGGGCGTGTCCAGTCTCTTCCGCGGCA
CAGTGCCGGCCGTTTCCAGGGCAGTCCTGCTGACCATCGGAACGAATGCA
GCCTACGACCAAGTAAAGCAGATGCTCAAGATCGCAACGGGGGCAGGAGA
GGGAGTACCACTGCACTTTGCCACATCCACGATAGCTGGATGCATTGCCG
TGGTGATAACGCAGCCGCTCGATGTGATCAAGACGACTTTCATGAACGCC
CAGCCGGGGGAGTTCTCCGGGATCGGAGGTGCTTTTCTGAGTACCGCCAA
ACAGGGCCCATTGGCCTTCTACAAGGGATTCATTCCGGCCCTGATACGAG
TGTCACCCAATACGATTATCACCTTCGTTTTGTACGAGCAGGCGCGAATG
CGATTTGGATATCTGCCACCTGACAAGTAGAAGCTTTCTAGACCAT
BS23584.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-RA | 864 | CG11196-PA | 1..864 | 17..880 | 4320 | 100 | Plus |
| Dic3-RB | 513 | CG11196-PB | 1..513 | 17..533 | 2490 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-RA | 1001 | CG11196-RA | 42..905 | 17..880 | 4320 | 100 | Plus |
| Dic3-RB | 997 | CG11196-RB | 42..901 | 17..880 | 4225 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:35:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7993894..7994344 | 880..430 | 2255 | 100 | Minus |
| 2R | 25286936 | 2R | 7994515..7994927 | 429..17 | 2065 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:35:04 has no hits.
BS23584.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 12:09:27 Download gff for
BS23584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11196-RA | 42..905 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:56 Download gff for
BS23584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 42..905 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:05 Download gff for
BS23584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 42..905 | 17..880 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:05 Download gff for
BS23584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7993894..7994344 | 430..880 | 100 | <- | Minus |
| 2R | 7994515..7994927 | 17..429 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:56 Download gff for
BS23584.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3881399..3881849 | 430..880 | 100 | <- | Minus |
| arm_2R | 3882020..3882432 | 17..429 | 100 | | Minus |
BS23584.pep Sequence
Translation from 16 to 879
> BS23584.pep
MGEDSSRRLPRWWFGGVCAAIAVTGTHPIDLIKVQLQTQSQADRKTVGEI
LKGIHERSGILGFYNGISASWFRQLTYTTTRFALYEAGKDYVDTQKVSSK
MALATFAGIVGGIVGVPGDVVTVRLQNDVKLPEEKRRNYKHVFDGLFRIY
KEEGVSSLFRGTVPAVSRAVLLTIGTNAAYDQVKQMLKIATGAGEGVPLH
FATSTIAGCIAVVITQPLDVIKTTFMNAQPGEFSGIGGAFLSTAKQGPLA
FYKGFIPALIRVSPNTIITFVLYEQARMRFGYLPPDK*
BS23584.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:07:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-PA | 287 | CG11196-PA | 1..287 | 1..287 | 1474 | 100 | Plus |
| Dic1-PC | 280 | CG8790-PC | 6..279 | 8..283 | 730 | 51.4 | Plus |
| Dic1-PA | 280 | CG8790-PA | 6..279 | 8..283 | 730 | 51.4 | Plus |
| Dic1-PB | 280 | CG8790-PB | 6..279 | 8..283 | 730 | 51.4 | Plus |
| Dic3-PB | 170 | CG11196-PB | 1..136 | 1..136 | 703 | 100 | Plus |
