BS23587.complete Sequence
1388 bp assembled on 2011-02-16
GenBank Submission: KX802174
> BS23587.complete
GAAGTTATCAGTCGACATGGTAAACTTTGTGCACCCCGAGGAAATGTATC
TCTTTGTGGAGAGCATTCGTCCATTTGAGGTGCGTGAGGTGGGCAGCCCG
AAGTGGCTGGAGGTGCACGAGATGATCCTCGGGCTGAGCCAGCAGGCCGC
CTTGGAGCTGTCCCAGAATCGCGAGGAGGAGGTGAAGGAGTTCCTCATCT
CGCGCGACAAGCTACGCGTGCTGATCCACGAAGCCTATTGCGTAACGTTG
TGGAAGACGCGTGTTCTGCCGCATCTGCTGGAGATTGATCCCAATCCGCA
GGCCACGTTCCTTATCTACACGGTGCTATATCACGAGGCTGCTTTGGTAG
CGCTTCTGGATGTGTGTCTCTACCATCCCAGTGGCTGTGAGACGCTGCAG
GAGTCTGTGCTGGATTTGATTGACTATTGCGCCCAGGCCATTTCCCAGGT
CATTGGCTTGGTCAGCATGGGTTACCACGAGAACGAGACAAAGCTGGACG
TGGATGAGGCAGTGCTCACGGAGCTGGAGCGCCAGAAGCGCGACTTTATC
TATAAGATTGGACTGCGCTGCATCTCAGTGCTGAACTACATAGCAGATAA
TGTGACATTGTTTCATCTAAGCGCCGCACGCCGTTTGCTGGTGACCCATG
ACATTCCGTGGCTCATGGCAGATGTACTTAGCTTCCGTCCGTGGCAGAGA
AAGACCAGCAAGGGCATTCAGAAGTTCATCGACGAGAAGTGGACCAATGT
GGACGACGTCACCAAGATTGTCAAGCCAGAGGCGCAGGCCTGGTTTTGTG
TGCGTCAGCTGCTCCTTAATCCTCAGATCATGGAGAACTATGCTTTCAAC
GAGGCACGCTGCAAGCAGTTACACAAGCTTTTGGGTCTCATGCACGAGCC
GTTGCTGGACCAGCTGCCGCCACTTATAGAGCTAAAGGTGTTCCTGAGCC
GCCTGACGCTCAGCGGCAATACGGCCAAGACACAGCCGCTCTTGCTGGAG
GACATTCCGCAGATCCAGGAGGAACTGCTCAAGGATGTCGAGGAAAATGG
CGGCTTCTATCAGATTGCCCAGGATCAGGACTCGGTTTTCCTTAGCAAGA
ACAAGGAAAACATCTGCGCTTTGGCCACTCGCCTCAGCAAAGCCTACGGC
ACGGACTTGCTCTGTGAACTGGAGCAGAATATGGATGATCTCAAGATGGG
CGAAGCAAAGGATGCCGGCGCTGGTGGCGATGGAGATACGGACCATACCT
GCGCCACTTGCCAGGCAAAGGCCAAAAAGAAATGTGCCTGCTGCAAGAAG
GTGCACTACTGCTCCCGTGATTGTCAGCTCAAGGATTGGCCACAGCACAA
GCTCGTCTGCCTTAAAACTTAAAAGCTTTCTAGACCAT
BS23587.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:37:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zmynd10-RA | 1356 | CG11253-PA | 1..1356 | 17..1372 | 6645 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zmynd10-RA | 1497 | CG11253-RA | 79..1434 | 17..1372 | 6645 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:37:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13025689..13026359 | 687..17 | 3280 | 99.3 | Minus |
| 3L | 28110227 | 3L | 13024938..13025379 | 1317..876 | 2150 | 99.1 | Minus |
| 3L | 28110227 | 3L | 13025440..13025630 | 877..687 | 955 | 100 | Minus |
| 3L | 28110227 | 3L | 13024826..13024881 | 1372..1317 | 280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:37:47 has no hits.
BS23587.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-16 15:09:58 Download gff for
BS23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11253-RA | 79..1432 | 17..1370 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:55 Download gff for
BS23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11253-RA | 79..1432 | 17..1370 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:50:05 Download gff for
BS23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zmynd10-RA | 79..1432 | 17..1370 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:50:05 Download gff for
BS23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13025440..13025629 | 688..877 | 100 | <- | Minus |
| 3L | 13024828..13024880 | 1318..1370 | 100 | <- | Minus |
| 3L | 13024938..13025377 | 878..1317 | 99 | <- | Minus |
| 3L | 13025689..13026359 | 17..687 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:55 Download gff for
BS23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13017928..13017980 | 1318..1370 | 100 | <- | Minus |
| arm_3L | 13018038..13018477 | 878..1317 | 99 | <- | Minus |
| arm_3L | 13018540..13018729 | 688..877 | 100 | <- | Minus |
| arm_3L | 13018789..13019459 | 17..687 | 99 | | Minus |
BS23587.pep Sequence
Translation from 16 to 1371
> BS23587.pep
MVNFVHPEEMYLFVESIRPFEVREVGSPKWLEVHEMILGLSQQAALELSQ
NREEEVKEFLISRDKLRVLIHEAYCVTLWKTRVLPHLLEIDPNPQATFLI
YTVLYHEAALVALLDVCLYHPSGCETLQESVLDLIDYCAQAISQVIGLVS
MGYHENETKLDVDEAVLTELERQKRDFIYKIGLRCISVLNYIADNVTLFH
LSAARRLLVTHDIPWLMADVLSFRPWQRKTSKGIQKFIDEKWTNVDDVTK
IVKPEAQAWFCVRQLLLNPQIMENYAFNEARCKQLHKLLGLMHEPLLDQL
PPLIELKVFLSRLTLSGNTAKTQPLLLEDIPQIQEELLKDVEENGGFYQI
AQDQDSVFLSKNKENICALATRLSKAYGTDLLCELEQNMDDLKMGEAKDA
GAGGDGDTDHTCATCQAKAKKKCACCKKVHYCSRDCQLKDWPQHKLVCLK
T*
BS23587.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:32:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zmynd10-PA | 451 | CG11253-PA | 1..451 | 1..451 | 2374 | 100 | Plus |
