BS23592.complete Sequence
1064 bp assembled on 2011-02-07
GenBank Submission: KX801644
> BS23592.complete
GAAGTTATCAGTCGACATGCATAAAATTGTTTGGTTTGGAACTTTAAATA
AGTCGATTGGCTACATCGGGAAAAAGAAGACCTGTCTTCTGAGTCCATGC
GAGAAAATATGCCTGAATTCAGCTAGAAAAACAGTACAGAGATGCGACAA
AAACTATTCACCACCAAAGTTAAGAAGAATCAAGAATTTCTATACCTACA
GTGTTGTATTGGGGAGTCTCTTCAGTATAGTCATGTGGGCCATCTATAAG
CTGGGCAAGCCCGAGGAAGACCATCGGGGTCCCATAGAAGATGAGTTCAG
TCAGCTTCCCTGGTTCCGCCAGTACATAATGAGGATGTGGCACACACTTC
AGTATTATGAAAAAATGATGGAAGAGCCCCAGATGGCAAGGCTGCTGCCA
AATGTTGTCCCACCGCCGTATATACAACCTCCCTATTCACTGGTGCTGGA
AATCAAAGACGTACTGGTGCATCCAGATTGGACTTATCAGACGGGGTGGC
GGTTTAAAAAGCGGCCTGGTGTGGATTACTTTCTTCAGCAGTGCAGTCGA
AATTTTGAAATTGTAATATATACTTCTGAACAAGGTATGACCGCATTCCC
CCTTCTGGATGCTTTAGATCCCTATGGCTACATAAAATATCGGCTAGTAA
GAGGTGCCACGGACTTGGTAGAGGGTCAGCATACCAAGAACCTCGATTAT
CTTAACAGGGATCTGAGCCGTGTGATAGTGGTGGACTGTGATCCGTATAC
CACTCCCCTGCATCCCGATAATAGCTTGGTGCTCACAAAGTGGCTGGGTA
ACGATGATGATGTCCAGCTCTTTGATCTCACGGCTTTCCTGCAGTTGATT
GCCGAACACCAAGTAAATGATGTAAGGGAGGTGCTGCGATACTATCGCCA
ATTCGAGGACCCCATGGAACAGTTTAAGGACAACCAACGTCGACTGCAGG
AGCAGAGTCAGGAAAGCATTCAGAATTTACCAACTAGTGAACGTCAGTGG
AACTTAACTTTATTGGGACGCTCCCTTCGAGGGTCTTCAATCAAATAAAA
GCTTTCTAGACCAT
BS23592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:20:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-RA | 1032 | CG6691-PA | 1..1032 | 17..1048 | 5115 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:20:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-RA | 1107 | CG6691-RA | 57..1089 | 17..1049 | 5120 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:20:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22079688..22080720 | 17..1049 | 5120 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:20:12 has no hits.
BS23592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 14:20:18 Download gff for
BS23592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 17..1046 | 17..1046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:54:40 Download gff for
BS23592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 57..1086 | 17..1046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:58:00 Download gff for
BS23592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm3-RA | 57..1086 | 17..1046 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:58:00 Download gff for
BS23592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22079688..22080717 | 17..1046 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:54:40 Download gff for
BS23592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22079688..22080717 | 17..1046 | 99 | | Plus |
BS23592.pep Sequence
Translation from 16 to 1047
> BS23592.pep
MHKIVWFGTLNKSIGYIGKKKTCLLSPCEKICLNSARKTVQRCDKNYSPP
KLRRIKNFYTYSVVLGSLFSIVMWAIYKLGKPEEDHRGPIEDEFSQLPWF
RQYIMRMWHTLQYYEKMMEEPQMARLLPNVVPPPYIQPPYSLVLEIKDVL
VHPDWTYQTGWRFKKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDAL
DPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHP
DNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYYRQFEDPM
EQFKDNQRRLQEQSQESIQNLPTSERQWNLTLLGRSLRGSSIK*
BS23592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm3-PA | 343 | CG6691-PA | 1..343 | 1..343 | 1849 | 100 | Plus |
| ttm50-PB | 428 | CG2713-PB | 149..428 | 61..335 | 911 | 59.3 | Plus |
| ttm50-PA | 428 | CG2713-PA | 149..428 | 61..335 | 911 | 59.3 | Plus |
| ttm2-PA | 409 | CG12313-PA | 124..382 | 53..312 | 771 | 54.4 | Plus |
| CG5830-PA | 329 | CG5830-PA | 130..294 | 165..331 | 197 | 28.1 | Plus |
