BS23601.complete Sequence
633 bp assembled on 2011-01-25
GenBank Submission: KX801358
> BS23601.complete
GAAGTTATCAGTCGACATGATGCACACACCCCGCCTGTCGAATATTAAGC
GGGCATCGGTGCTCCTCGTCACCGCCCTGCTCCTCTATGTCTTCGTTTTC
TCCAGTGGCTATCAGAAGTACCAGATCGAGGGCATTATCAAGCAGAGTCA
ACCGGAAAAGGTCTGGGAGTATGTGGCGGATTTTAATAAGATGCGTCTGC
TCAATCCCACCATTTTAAACTTCAAGATCCTAGCTGATCATGGCCACGCC
CACGACTGGCGTTACACGGTGCAATACACAGAGAGATTATCCCATTGGCC
ATACTGGCTGAATACGGCCACGGCCAAGTACGTGGTCACCAAGTCATTGC
CCGGAGTATCGCCCGTGGCCTATGCCATTAAGTCCACGCATCAGACTTGC
TTCTTTGCCGGATTCTATTGCCTACAATCACTGAGTGAATTCACGTTCAG
AAACTCCAATGGTGATACCTTTGCCCAGGAGAACATCCAGTATCAGTGTC
CACCACTCTTGGGCGGCATGTGTAGGCGGGAACTGGAGTTCCAGCGCCAG
GCGGTGATGCACAACTTAACGATAATATTCGGAAAACAGAGAGGATAGAA
GCTTTCTAGACCATTCGTGGGGCCCCCTAACGG
BS23601.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6310-RA | 582 | CG6310-PA | 1..582 | 17..598 | 2835 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6310-RA | 690 | CG6310-RA | 20..602 | 16..598 | 2840 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11069648..11069845 | 213..16 | 990 | 100 | Minus |
| 3L | 28110227 | 3L | 11069368..11069576 | 422..214 | 970 | 97.6 | Minus |
| 3L | 28110227 | 3L | 11069131..11069306 | 598..423 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:35:10 has no hits.
BS23601.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:17 Download gff for
BS23601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6310-RA | 10..591 | 17..598 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:00:35 Download gff for
BS23601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6310-RA | 21..602 | 17..598 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:53 Download gff for
BS23601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6310-RA | 21..602 | 17..598 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:53 Download gff for
BS23601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11069131..11069306 | 423..598 | 100 | <- | Minus |
| 3L | 11069368..11069576 | 214..422 | 97 | <- | Minus |
| 3L | 11069648..11069844 | 17..213 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:00:35 Download gff for
BS23601.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11062748..11062944 | 17..213 | 100 | | Minus |
| arm_3L | 11062231..11062406 | 423..598 | 100 | <- | Minus |
| arm_3L | 11062468..11062676 | 214..422 | 97 | <- | Minus |
BS23601.pep Sequence
Translation from 16 to 597
> BS23601.pep
MMHTPRLSNIKRASVLLVTALLLYVFVFSSGYQKYQIEGIIKQSQPEKVW
EYVADFNKMRLLNPTILNFKILADHGHAHDWRYTVQYTERLSHWPYWLNT
ATAKYVVTKSLPGVSPVAYAIKSTHQTCFFAGFYCLQSLSEFTFRNSNGD
TFAQENIQYQCPPLLGGMCRRELEFQRQAVMHNLTIIFGKQRG*
BS23601.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:07:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6310-PA | 193 | CG6310-PA | 1..193 | 1..193 | 1034 | 100 | Plus |
