BS23607.complete Sequence
1292 bp assembled on 2011-02-07
GenBank Submission: KX805179
> BS23607.complete
GAAGTTATCAGTCGACATGTTTTCGGCGGTGAAGCCGCTCTCCAAGTATC
TCCAGTTCAAGTCAATACGCATCTACGATTCCGTCTTCACCATCCACTCC
AGGTGCACCGTCGTCATCCTGCTCACCTGCTCGCTTCTCCTGTCCGCGCG
TCAGTACTTTGGGGATCCGATCCAGTGCATCAGCGAGGAGAAGAACATCG
AGTACATACAGTCCTACTGCTGGACCATGGGCACCTACATCCTCAAGCTG
GACGACTTCGGCGATCAGGAGCAGGCGCTGGTTTCCCCAAATCAGGAAGT
CTCCTACAACTCTGCCTTCTTCTCATCCGCCACAACCAACGCACCGCAGT
CATCGTCGAGGGTCCGCACCAGGCCCCACTTCAGATCGAGTCTGCGCAGG
ATTGGCGAGTACAACGAGGCCTACGCGCGGTCCCTGTCGATAGCCGAGGG
CGTGGGCCCCGAGATTCGTGGCCAGACGGAGCGGCAGTATCTGCGCTACT
ACCAGTGGGTCATCATCCTGCTGCTCTTCCAGTCGTTCGTCTTCTACTTC
CCCTCGTGCCTGTGGAAGGTGTGGGAGGGCCGGCGGCTTAAGCAGCTCTG
CTCGGAGGTCGGCGACGCGCTCCTCTCGGAGGAGACCTACAATACCCGGC
TGCGCATGCTGGTCAAGTACTTCACCACCGACTACGAGGACATGCACTTT
TGCTACATGGCCAAGTACGTCTTCTGCGAGGTCCTCAATTTCCTCATCAG
TGTGGTGAACATAATCGTGTTGGAAGTGTTCCTGAACGGATTCTGGTCGA
AGTATCTGCGCGCGCTGGCCACCATTCCGTTCTACGACTGGGATCGCTGG
AACCGCGTGTCCTCGAGCGTCTTCCCGAAGATCGCCAAGTGCGAGGTGCT
CAAGTTCGGGGGCAGCGGCACGGCGAACGTTATGGACAACCTGTGCATCC
TGCCGCTGAACATTCTGAACGAGAAAATCTTCGTCTTCCTTTGGGCGTGG
TTCCTGCTCATGGCCCTGATGTCCGGTTTGAACCTTCTGTGCCGGCTGGC
CATGATTTGCAGCAGGTATCTCCGAGAGCAGATGATACGCAGCCAGTTGC
GTTTCATGACCAAACGGCATGTGAAGCGTGCCCTGCGGGACCTGACCATC
GGCGACTGGTTCCTGATGATGAAGGTTAGCGTCAACGTAAATCCTATGCT
CTTCCGCGACCTAATGCAGGAACTTTGCGAGCTGCGCACCTCCGCATCGG
GCAGCACCCTGGAGAGTCCCGTCTAGAAGCTTTCTAGACCAT
BS23607.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inx5-RB | 1260 | CG7537-PB | 1..1260 | 17..1276 | 6300 | 100 | Plus |
| Inx6-RA | 1446 | CG17063-PA | 352..948 | 422..1018 | 690 | 74.4 | Plus |
| Inx6-RA | 1446 | CG17063-PA | 16..227 | 32..243 | 325 | 76.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inx5-RB | 1814 | CG7537-RB | 340..1599 | 17..1276 | 6300 | 100 | Plus |
| Inx6-RA | 1875 | CG17063-RA | 621..1217 | 422..1018 | 690 | 74.4 | Plus |
| Inx6-RA | 1875 | CG17063-RA | 285..496 | 32..243 | 325 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:24:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19169807..19170544 | 754..17 | 3690 | 100 | Minus |
| X | 23542271 | X | 19168992..19169516 | 1276..752 | 2625 | 100 | Minus |
| X | 23542271 | X | 20268817..20269149 | 754..422 | 480 | 76.3 | Minus |
| X | 23542271 | X | 20269274..20269485 | 243..32 | 325 | 76.9 | Minus |
| X | 23542271 | X | 20268479..20268706 | 1018..791 | 315 | 75.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:24:13 has no hits.
BS23607.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 15:39:37 Download gff for
BS23607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| inx5-RB | 106..1358 | 24..1276 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:52 Download gff for
BS23607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inx5-RB | 347..1599 | 24..1276 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:54 Download gff for
BS23607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Inx5-RB | 347..1599 | 24..1276 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:54 Download gff for
BS23607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19168992..19169516 | 752..1276 | 100 | <- | Minus |
| X | 19169810..19170537 | 24..751 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:52 Download gff for
BS23607.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19063025..19063549 | 752..1276 | 100 | <- | Minus |
| arm_X | 19063843..19064570 | 24..751 | 100 | | Minus |
BS23607.pep Sequence
Translation from 16 to 1275
> BS23607.pep
MFSAVKPLSKYLQFKSIRIYDSVFTIHSRCTVVILLTCSLLLSARQYFGD
PIQCISEEKNIEYIQSYCWTMGTYILKLDDFGDQEQALVSPNQEVSYNSA
FFSSATTNAPQSSSRVRTRPHFRSSLRRIGEYNEAYARSLSIAEGVGPEI
RGQTERQYLRYYQWVIILLLFQSFVFYFPSCLWKVWEGRRLKQLCSEVGD
ALLSEETYNTRLRMLVKYFTTDYEDMHFCYMAKYVFCEVLNFLISVVNII
VLEVFLNGFWSKYLRALATIPFYDWDRWNRVSSSVFPKIAKCEVLKFGGS
GTANVMDNLCILPLNILNEKIFVFLWAWFLLMALMSGLNLLCRLAMICSR
YLREQMIRSQLRFMTKRHVKRALRDLTIGDWFLMMKVSVNVNPMLFRDLM
QELCELRTSASGSTLESPV*
BS23607.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Inx5-PB | 419 | CG7537-PB | 1..419 | 1..419 | 2194 | 100 | Plus |
| Inx6-PA | 481 | CG17063-PA | 1..385 | 1..403 | 1205 | 54.8 | Plus |
| zpg-PB | 367 | CG10125-PB | 1..356 | 1..408 | 951 | 43.4 | Plus |
| zpg-PA | 367 | CG10125-PA | 1..356 | 1..408 | 951 | 43.4 | Plus |
| Inx2-PD | 367 | CG4590-PD | 89..349 | 142..403 | 528 | 36.6 | Plus |
