BS23622.complete Sequence
2309 bp assembled on 2011-02-16
GenBank Submission: KX805992
> BS23622.complete
GAAGTTATCAGTCGACATGCATTCAGTGTTGCCGTTGATGTATCGTAGAA
GGAGTTCCCATCTGAAGGCCCTCCAATGGACGATCCAGTCGAGCCAGAAT
TTCTTCAAGATGAGCTTCAAAGCGCCATCGATAAAAGTGCCTAAGGCTGC
CGCCATTAAGGAATTGGCCAATAAACCAACGCAACCCCAGTCTCAGCCCT
CGCAATCGCAGTCTTCGGCAACACAACCAACTCAACCGCCTCAGCAAGCG
GAAATCAAAAAGAATCCTTTGACAATGGGCGCCATTAGCCCCGCACCACC
CACTCCCATTAGCCCAAAACCCTCAGTTCAACCAAAAATCCCAGATCAGC
GGGCCAAGTGGATGGCCAAGGTTTCTCCGGAATCGCAGAGAAAAGCGAAA
TTGGCAGCTGCAGGAGGTTCTCCGCCTTCCGGTCCACCAAAGAACCAGTT
TAGCCAAGCAAATAATCCCAGTTTCGCGATGCCCGGTCAAAGTTCGCCTG
CAAACTTTAGTGCTGCACCTAAAACTCAAGCCTCCTGGCAGCAAAAGGTG
GAAAAATCTGCGGAAAATGAAGATTCCGGTGCATTCAAGGGTGCCTCTTC
TGAGTCTCAACGAAAAAACTGGATGAACCGCATGCAGGGATCGCAACAAA
GGAAACAGAATCAGTGGCTGAAAGAGATGCAGGCCAAACAGCAGGCTGGC
AAGGATATTCAGGCACAGAAGATGCAGAAAATGGAGTCTCAAAAGGCCAC
GACGACCCCAGCTGCACCACCTAAAGAAGCGGCTCCATCCACTCCACAAC
CGGCCGAAAAGCCCGAAGAAAAGAGTCCAGAACATTTGGCATACTTAGAT
GCGATCAAGCAACTGAATAGCTATCAGGTTTTGGAACCCACTTCCGGCAG
AGCCACCACCAAGAGCAGTAGAAAGGAACAGGATCCGGTTATCGAGCAAA
CTTTGGAGTGCCTGGAAAAGTCGGGTCTTACGAAAAAGGATCTGAAGGCC
ATACCCGTAATACAGGTAGCCGGTTCCAAAGGACGGGGCTCAACGTGTGC
CATCGTGGAGAGTATTCTTCGGTGTCATGGGGTGAAAACTGGTGTTCTCT
CCTCGCCGCACCTGTTTTTAACCAGCGAAAGGATAAGGATCGACGGTGAA
CCCCTGAGCGATGTTCAGTTTACGGAACTCTTTTGGAAAATCAACACTGA
TCTAGCGAATATGCAACCCACACCTTCCTATAACAAAATCATGACGGTCA
TGGCTTTCCACGCTTTCCATCAAGCCGGCGTTGAGGTGGCCATTTTAGAA
GTGGGAAATGCAGGCGCCAGTGATGCCACCAACATAGCCTCGCATGCCCA
GACCATAGGGATAACAACATTGGGATGGGAGCAGAGCTCGAATTTGGGAA
ATTCTTTAAGGGATATAGCCTGGGCGAAGGCGTCCATTATGAAGCCGGAG
GCCAATATCTATACGAATGTCACCCAAACGGAATGCTGTGAGGTTTTGGC
CCAAAAGGCCAAACAAATTGGCGCCCAACTTCGCCGTGTGCCAACATTTA
ACGACTATGTCGAAGGTGATATGAACAACAAGCTGCTGATGAACAAGGCA
AACTACTCTATGAGATTGAACGGATCCCTGGCCGTACAATTGGCCTACGA
TTTTTTGAAGCGACACAAGCCCGAATATGTGGTAGGATTGGAACATAATT
CTACTCTGCTAACACCGGGAGCTAGTCGCGGAATCGAGATCTTTGAACAG
CCCGGACACTTTGACTTCATGCGACACGACATGTTTAATGTCTATTTGGA
TAGCGCCGATACCTTTGAGTCGATGATGGCCTGCCGGGATTGGTTTTACA
CCAGAACACGTGCAAATCGACAGCCAAAAATCCTGCTGTTTAACAAGGTC
AACGAGTTCAATGCCAAGGATCTTCTGACTATTATACGCAGTAATTTGCG
CTTCGAAGAGGCCTGTTTTGTGCCCAATCCCAACTACTTCGAGGGCGAAA
TCCTGGCCGAGGAGGATGGTAAGGCGATGGTATGGCACGGCATGGAGGAG
CTGCAAAGGGCCAAGAGGAATGCCGGAAATTGGAGAGCTCTCTGCGAGGA
GAATGGCAAAAGGGACAACTCGCAACTTTCCATATCCATCAATGCCTTCT
TCGAGTACCTGACCAATAAGTACGGCAAACAGAAGTACGGAATGAAGAAC
GAACTGGATGTCCTGGTCACCGGCTCCCGGCAATTGGTGGCCGCCACCAT
ATCGTGTCTACGAAAAATGAAGTCATCGAATCCTTGGCAATGAAAGCTTT
CTAGACCAT
BS23622.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:42:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31773-RA | 2277 | CG31773-PA | 1..2277 | 17..2293 | 11385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:42:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31773-RA | 2493 | CG31773-RA | 109..2387 | 17..2295 | 11395 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:42:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3911902..3914180 | 2295..17 | 11395 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 06:42:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3428..3515 | 1663..1750 | 116 | 59.1 | Plus |
BS23622.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:18:40 Download gff for
BS23622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31773-RA | 109..2384 | 17..2292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:13 Download gff for
BS23622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31773-RA | 109..2384 | 17..2292 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:06 Download gff for
BS23622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31773-RA | 109..2384 | 17..2292 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:06 Download gff for
BS23622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3911905..3914180 | 17..2292 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:13 Download gff for
BS23622.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3911905..3914180 | 17..2292 | 100 | | Minus |
BS23622.pep Sequence
Translation from 16 to 2292
> BS23622.pep
MHSVLPLMYRRRSSHLKALQWTIQSSQNFFKMSFKAPSIKVPKAAAIKEL
ANKPTQPQSQPSQSQSSATQPTQPPQQAEIKKNPLTMGAISPAPPTPISP
KPSVQPKIPDQRAKWMAKVSPESQRKAKLAAAGGSPPSGPPKNQFSQANN
PSFAMPGQSSPANFSAAPKTQASWQQKVEKSAENEDSGAFKGASSESQRK
NWMNRMQGSQQRKQNQWLKEMQAKQQAGKDIQAQKMQKMESQKATTTPAA
PPKEAAPSTPQPAEKPEEKSPEHLAYLDAIKQLNSYQVLEPTSGRATTKS
SRKEQDPVIEQTLECLEKSGLTKKDLKAIPVIQVAGSKGRGSTCAIVESI
LRCHGVKTGVLSSPHLFLTSERIRIDGEPLSDVQFTELFWKINTDLANMQ
PTPSYNKIMTVMAFHAFHQAGVEVAILEVGNAGASDATNIASHAQTIGIT
TLGWEQSSNLGNSLRDIAWAKASIMKPEANIYTNVTQTECCEVLAQKAKQ
IGAQLRRVPTFNDYVEGDMNNKLLMNKANYSMRLNGSLAVQLAYDFLKRH
KPEYVVGLEHNSTLLTPGASRGIEIFEQPGHFDFMRHDMFNVYLDSADTF
ESMMACRDWFYTRTRANRQPKILLFNKVNEFNAKDLLTIIRSNLRFEEAC
FVPNPNYFEGEILAEEDGKAMVWHGMEELQRAKRNAGNWRALCEENGKRD
NSQLSISINAFFEYLTNKYGKQKYGMKNELDVLVTGSRQLVAATISCLRK
MKSSNPWQ*
BS23622.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:14:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31773-PA | 758 | CG31773-PA | 1..758 | 1..758 | 3941 | 100 | Plus |
| CG2543-PB | 542 | CG2543-PB | 69..530 | 279..748 | 743 | 37.5 | Plus |
| CG2543-PA | 572 | CG2543-PA | 99..560 | 279..748 | 743 | 37.5 | Plus |
