BS23630.complete Sequence
1856 bp assembled on 2011-02-15
GenBank Submission: KX804786
> BS23630.complete
GAAGTTATCAGTCGACATGATCACCGTGATGCCCAATAAAACTGCCATGA
CGAAAGTCGAGCCGCCCAACAACGCTCTCAAAGTCACACTACATGGACCA
GTACAGAGTAATGGAGCTGACGGCGTGGACTTGCGCTTGGAATGGCGGAG
CTCAGATTTAAATGTGACTTACCGCCGGACCGAGGTGTGGAACATTGGCA
TAAGCAATGATGATACGGCATACGCGAAAGTGTCGAGAAACTTCATGGTC
AAAAGAACGGGAGGGGCAGATAGTCAAGCAGTTATCTCGCTGGAGAGTAA
ACGGAATTCTCCGATATCCCTGCACGTTGTTATAGACACAAATCCGATGG
TCACTGATATGTGCCTCGTTTGTGCAGGGCTCTTGATCCTTGGACTCTAT
ATGCTGATCATTTTTGACGTAATCGATCACACCTTTGCTGCACTCATTAT
AGCTACCACAGCTGTCGCGATTCTCGCTATCCTGGAGCACCGGCCCAGCA
TGCGTGCGATAGTATCATTTGTTAACTTCGAGCCCCTAATGTTGCTCTTC
GGGCTAATGACCATTGTGGATATTATGGCGACAACGGGTGTCTTCGATTT
CCTGGTCGTTTGGACCTACAGGATTTCCAGGGGTCGACCGTGGCCGCTTA
TTTTTTTTCTGAGCATGCTGACCGCTTTTTTGTCCGCTTTCCTGAACAGC
GATATCATGGCTTTGTCACTAACCCCAATAACTATCCGTCTGTGCGAGGA
GATGTCCCTGCGAACCAGCTACGTTCTGGTCGTAATGGCTATATTCGCAG
ATATGGGCGGTGCATTAACGCCTTTGGGAAATCCACCCAATGCGATCGTA
ACGACAAGTCCGGTTGCGGTTGCGGAAGGAGTTGACTTTGCCCACTTTAT
AATACACATGATGCCAGGAGTGCTGGCCGCGATGTTCGTGGTCTTTGGTA
TAATTTACGTGACCCACAGAAAAAGTATATTTGTCCTGGATCAAAATCAG
TTGGATCTTATGGAGGAGAGAGCAAGAGGAAAAAAACCGCCCAGCCAGGA
AACCCTAGATCGCATAGCTCTCCTCAAGGGTAGCTTGCCAGGCAAGTACT
GGTTGAGGCCAGTAGAAGGCTATCCAGAAACATTGGCTGAGTTGGAGGCG
AGCAGTCGGATTCTCGATAAGCCGCTTCTGGTTAGGTGCTGCATAGCCCT
CATCTTCGCCTTCCTCTGCATGCTCCTCCACTCGATACCCAAAGTAGCAG
ATGGGGCTTCCTTGGGCTGGGTAACTTTGCTAGCCGCCTTCTTGCTCATT
ATCCTGGACGACAAAAACGACCTGAACGCCACACTCGGCATAATCCAGTG
GACAATCCTCCTATTCATAGCAGCCCTTTTTGTTTTGTCTGAGGCCGTGG
ATCAGTTGGGATTTTTTGAATGGCTCGGGGACAGAACGGTTGGATTTCTT
AGGAGTTTGGAACCACAGAACCAGATTGCGGTAACCACCATGGTAATTCT
ATGGACGACCGCCCTACTTACAATCTTTATCGACAACGCCGCTGTTACAA
TATTTATGCTTAAGTTCAGCATCGAGATGGCCAGCAACGATGACATCCCC
CTGCCACCGATGTTTTGGGCGTTGACTTTTGGAGCCTGTTTTGGGGGAAA
TGGGTCTTTATTTGGGGCCGTTTCCAATGAGATTATTGCGCTGATCGCCC
TACAGCATGGCTATAAGATATCTTTCTGGCACTTTTTCGCCATCGGATTT
CCACTAATGTTGGTGACCATGGTAATTGGTTCGGGATACCTTTTAATCGC
ACACTCAGTTCTAAGTTGGAACTTACATTTGGTTCGTTAGAAGCTTTCTA
GACCAT
BS23630.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:42:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31693-RB | 1824 | CG31693-PB | 1..1824 | 17..1840 | 9075 | 99.8 | Plus |
| CG31693-RA | 2067 | CG31693-PA | 244..2067 | 17..1840 | 9075 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:42:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31693-RB | 2080 | CG31693-RB | 231..2055 | 17..1841 | 9080 | 99.8 | Plus |
| CG31693-RA | 2145 | CG31693-RA | 287..2111 | 17..1841 | 9080 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:42:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22015476..22017300 | 17..1841 | 9080 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:42:48 has no hits.
BS23630.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:29 Download gff for
BS23630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RB | 190..2013 | 17..1840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:11 Download gff for
BS23630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RA | 287..2110 | 17..1840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:30:29 Download gff for
BS23630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31693-RA | 287..2110 | 17..1840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:30:29 Download gff for
BS23630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22015476..22017299 | 17..1840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:11 Download gff for
BS23630.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22015476..22017299 | 17..1840 | 99 | | Plus |
BS23630.pep Sequence
Translation from 16 to 1839
> BS23630.pep
MITVMPNKTAMTKVEPPNNALKVTLHGPVQSNGADGVDLRLEWRSSDLNV
TYRRTEVWNIGISNDDTAYAKVSRNFMVKRTGGADSQAVISLESKRNSPI
SLHVVIDTNPMVTDMCLVCAGLLILGLYMLIIFDVIDHTFAALIIATTAV
AILAILEHRPSMRAIVSFVNFEPLMLLFGLMTIVDIMATTGVFDFLVVWT
YRISRGRPWPLIFFLSMLTAFLSAFLNSDIMALSLTPITIRLCEEMSLRT
SYVLVVMAIFADMGGALTPLGNPPNAIVTTSPVAVAEGVDFAHFIIHMMP
GVLAAMFVVFGIIYVTHRKSIFVLDQNQLDLMEERARGKKPPSQETLDRI
ALLKGSLPGKYWLRPVEGYPETLAELEASSRILDKPLLVRCCIALIFAFL
CMLLHSIPKVADGASLGWVTLLAAFLLIILDDKNDLNATLGIIQWTILLF
IAALFVLSEAVDQLGFFEWLGDRTVGFLRSLEPQNQIAVTTMVILWTTAL
LTIFIDNAAVTIFMLKFSIEMASNDDIPLPPMFWALTFGACFGGNGSLFG
AVSNEIIALIALQHGYKISFWHFFAIGFPLMLVTMVIGSGYLLIAHSVLS
WNLHLVR*
BS23630.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31693-PB | 607 | CG31693-PB | 1..607 | 1..607 | 3094 | 100 | Plus |
| CG31693-PA | 688 | CG31693-PA | 82..688 | 1..607 | 3094 | 100 | Plus |
| CG11262-PA | 702 | CG11262-PA | 90..700 | 1..602 | 1412 | 44.1 | Plus |
| CG13801-PA | 690 | CG13801-PA | 56..690 | 1..602 | 1131 | 37.5 | Plus |
| hoe1-PH | 658 | CG12787-PH | 82..658 | 55..602 | 1038 | 37.4 | Plus |
