Clone BS23631 Report

Search the DGRC for BS23631

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:236
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG14346-RA
Protein status:BS23631.pep: full length peptide match
Sequenced Size:671

Clone Sequence Records

BS23631.complete Sequence

671 bp assembled on 2011-01-25

GenBank Submission: KX800821

> BS23631.complete
GAAGTTATCAGTCGACATGTTCCTGGACGACTTTGGAAATCCAAAGGAGG
TGACTCCCGAAACCCTGAGCACTTACACATACGATCTGCATGGCACCAAG
CTGCTGACATCGGCGGACACCGAGATTTACCTGCCGCCGATGTGGCATGG
CACGATTTACAGCACTGAAAAGCTGCTGGACACCTACAAGAGGCGGTTCA
ATCCGGATCCAACTCTGCTGACCTTCCACGCCATGCAGCCGTACGAACCC
GAGTTCATTTGCGTCCAACGGACTGTGATCGAGCTAACGCTCCTTCCGGC
TGGTCAGAGCCTCTACAGCGACAAGGACATCGTCGTGTTCCTGATCAAGC
AGCCCGCCGAGATGAAAAACTCGCTGGTCACAAAGGAACTGAGCACGCTG
CTGGACTTCTTTCCGCACAACCACCACTACCACTCGATAATCATGAACGA
GGGCATCGATGTAGTCTACGTGGACGACAAGATCTACAACAATATATCGC
CCACCAGTCACCAGTTCCACCGCCTGTACAATTTGCTTCGAAATATCCAG
CCGGACGACGTGCAGAGCCTCTCGGGTTCTCCATTGCCCGATGTGCTGCG
CAGTGCCTGCAGGAAGGCAGCCCACAAGACCAAGTAGAAGCTTTCTAGAC
CATTCGTTTGGCCCTTAAGGG

BS23631.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14346-RD 621 CG14346-PD 1..621 17..637 3105 100 Plus
CG14346-RC 621 CG14346-PC 1..621 17..637 3105 100 Plus
CG14346-RA 621 CG14346-PA 1..621 17..637 3105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14346-RD 755 CG14346-RD 48..669 16..637 3110 100 Plus
CG14346-RC 953 CG14346-RC 246..867 16..637 3110 100 Plus
CG14346-RA 860 CG14346-RA 153..774 16..637 3110 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1368530..1368964 203..637 2175 100 Plus
2L 23513712 2L 1368365..1368479 88..202 575 100 Plus
2L 23513712 2L 1368241..1368313 16..88 365 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:49:13 has no hits.

BS23631.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:18:03 Download gff for BS23631.complete
Subject Subject Range Query Range Percent Splice Strand
CG14346-RA 146..765 22..641 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:56 Download gff for BS23631.complete
Subject Subject Range Query Range Percent Splice Strand
CG14346-RA 159..778 22..641 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:50 Download gff for BS23631.complete
Subject Subject Range Query Range Percent Splice Strand
CG14346-RA 159..778 22..641 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:50 Download gff for BS23631.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1368247..1368313 22..88 100 -> Plus
2L 1368366..1368479 89..202 100 -> Plus
2L 1368530..1368968 203..641 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:56 Download gff for BS23631.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1368247..1368313 22..88 100 -> Plus
arm_2L 1368366..1368479 89..202 100 -> Plus
arm_2L 1368530..1368968 203..641 99   Plus

BS23631.pep Sequence

Translation from 16 to 636

> BS23631.pep
MFLDDFGNPKEVTPETLSTYTYDLHGTKLLTSADTEIYLPPMWHGTIYST
EKLLDTYKRRFNPDPTLLTFHAMQPYEPEFICVQRTVIELTLLPAGQSLY
SDKDIVVFLIKQPAEMKNSLVTKELSTLLDFFPHNHHYHSIIMNEGIDVV
YVDDKIYNNISPTSHQFHRLYNLLRNIQPDDVQSLSGSPLPDVLRSACRK
AAHKTK*

BS23631.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14346-PD 206 CG14346-PD 1..206 1..206 1096 100 Plus
CG14346-PC 206 CG14346-PC 1..206 1..206 1096 100 Plus
CG14346-PA 206 CG14346-PA 1..206 1..206 1096 100 Plus