BS23637.complete Sequence
680 bp assembled on 2011-01-25
GenBank Submission: KX800621
> BS23637.complete
GAAGTTATCAGTCGACATGGATTCGAATTGCGATTTATCGATGGTCAATG
GTCAAACGGAGCCCAAAGACCCAAAATGGGCGTCGTCGTCAACCCAGATA
ACTTCTCGGGCATCGGAAACCTTTTCCGGAGTTGGCTCGGCGATAAGCAC
TGAAACGTCCTTGCAGCCAGTGGCCGCGCCCACGATGTACTGCCTCCGAT
TGGCGCAGCAGAGGCCGATAACCGAACGGCACGTCCACTTTCATGCCGGC
GTTATCGATAACGAGCACATGAACCGGCGCAAATCGAAATGCTGCTGCAT
CTATCGAAAGCCACATCCTTTCGGCGAGAGTTCGTCCTCCACGGACGACG
AGTGCGAACACTGCTTTGGTCATCCCGAAGTGAGAACTCGCAATCGGTTG
GAAAAACAGCGGATACAGGAACAGCAAAACGGGTGCAGTTGCTGTCATCA
TCACCATCGACTTCATAGTAATCGGAATAATCGACCGCCTACCGAAGAGA
TCGCGCAGCATAAGGATGATCTGGCCAAAGAGGAACCAAAATCGGTAGTC
AACAATGAAAGTAGTCTAAAACTTTTAAACGAGGAAAATGTAAAATCATC
TAAACCAGAAAAAAAAAATAATTCAAATAACCGCCTCGAAGTAACTTTTG
TAGAGCTTGATTAAAAGCTTTCTAGACCAT
BS23637.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-3-RB | 648 | CG42707-PB | 1..648 | 17..664 | 3210 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-3-RB | 813 | CG11233-RB | 86..735 | 17..666 | 3220 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20881892..20882541 | 666..17 | 3220 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-26 15:49:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 1203..1249 | 582..631 | 107 | 74 | Plus |
BS23637.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:18:04 Download gff for
BS23637.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42707-RB | 86..731 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:59 Download gff for
BS23637.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-3-RB | 86..731 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:56 Download gff for
BS23637.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-3-RB | 86..731 | 17..662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:56 Download gff for
BS23637.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20881896..20882541 | 17..662 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:59 Download gff for
BS23637.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20752923..20753568 | 17..662 | 99 | | Minus |
BS23637.pep Sequence
Translation from 16 to 663
> BS23637.pep
MDSNCDLSMVNGQTEPKDPKWASSSTQITSRASETFSGVGSAISTETSLQ
PVAAPTMYCLRLAQQRPITERHVHFHAGVIDNEHMNRRKSKCCCIYRKPH
PFGESSSSTDDECEHCFGHPEVRTRNRLEKQRIQEQQNGCSCCHHHHRLH
SNRNNRPPTEEIAQHKDDLAKEEPKSVVNNESSLKLLNEENVKSSKPEKK
NNSNNRLEVTFVELD*
BS23637.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-3-PB | 215 | CG11233-PB | 1..215 | 1..215 | 1163 | 100 | Plus |
CG13994-PB | 163 | CG13994-PB | 6..147 | 30..167 | 278 | 43.1 | Plus |
CG13994-PA | 163 | CG13994-PA | 6..147 | 30..167 | 278 | 43.1 | Plus |