BS23658.complete Sequence
2255 bp assembled on 2011-02-16
GenBank Submission: KX805071
> BS23658.complete
GAAGTTATCAGTCGACATGAAGAGGCAGTTTGCCAAAATCAAAATAGCAG
CCGAAAATCTGTCAAGATCGAGCAAGTCGGACAGCAAGGACTCGGAGCTG
GAGGCGATCGAGCGGCAGGTGGACAGATATCGGGACACCATCGAGAAGAT
TGTCCGCAAGCTGCCGGCGCTGAGCGGCGGAGGCGGAAGTGGAAGCGGGA
GCAGCGAGGAGCAGGACAAGCGGACCAAGAAGAACAGTCACTACAAGATT
GCCCAGGCTCTGGACGAGTCCGCCAAGGAGCTGCCCAAGGACATGCCGCT
GCAGAAGGTCCTCGCCAATTGCGGCGAGCTGGAGAAGACGATGGCCGAGT
GCATCATCGAAAGCGAGCTGGAGACGGAGGCCAAGGTGGTGCGGCGGCTG
AAGAACATCTTGGACAAGGAGATACAGGAGATCTCCACGCTCAAGCGCAA
CGTGTCGCGCACCCTGCAGGAGTATACCTCGCTGAAGCGCAGCCATGAGG
CGGCAATCCGTCTGGAGGAACCAGCGGCCAAGGTTAACCACATCAAGAGC
CAGCAGGAGGAGTGCGAGCTGAAGCTGGAAAAGGAGCGGGATGCCTGGGC
GGCCCAGATGCTGGAGCTGATTGCCAAAGAGGACGAGATCGTTAGCTGCA
TCCGCGACTATGTACTCAACCAAAGAAACTATCACGAGCGCGCCCTGCAG
CACGTAAACGCCTCGCTGGCCCGCATCCAGGACACTATCCAGGGCACAGA
GAAGTCCCGCTTTGGCACCTCGCTCAAGGAGCATCTGACATCCACAAACC
GCGAGATCTCCTACATAGTGGAGCTGTGCTGCTGCTGTCTGTTAGAGCAC
GGCCTGGAGGAAGAGGGTCTGCTGCGAGTGGGCTGCGCGAGCACGAAACT
GCGGCGTATGAAGCACGCCCTGGAGGCGCAGCATGTAAAGACACCGCTTC
CGCTGGACTACCAGGATCCACATGTCATTGGTTCCATACTCAAGCTGTAC
TTGCGTGAGCTGCCCGAGCCGCTGCTCACTTACAACCTGTACAAGGACTT
CATCCGGATCGCTGAGAGGCACAGCGAGGCCGAGCGCAAGACAGAGATTA
AGGCCATTCTGACCAAGCTGCCAAAGGAGAACTACGCGAACCTGCGCTAC
CTCACCCGCTTCCTGTCCATCGTGCAGCAGCGCTCGGCGCTCAACAAGAT
GAGCTCGCAGAACCTGGCCATCGTGATGTCACCGAACATGCTGTGGCCAC
GCATCGACAAGAGCAGCAACGCTCCGGCCGACTACATTGGTCAGGTGAAC
AGCTCCTCGGCAGCCAACATCATTGTTGAGCTGCTAATCAGCCAGTGGGA
CTACTTTTTCATCGGCGAAGTCGAGTTCTACTTGACCCTGCAGAAGCAAA
AGCTCTTCGTCGAGGGCAAGAGCAAATCTAACTCCTCGAACGAAAACCTG
GATAGAAACGACAGTGAAGTCATGGAGAGTCCACGCTATGGTACATTGCG
CAGACAAAAAGCTAATGCACCTTCGCCTCCTACCACCAATGGAAATGGGA
TAATTATGACCACATCACAGACTTCGCACCGACCACATGCAAAGGAGCTG
TTCCCGCAGCAGACGCCGGAAAAGCAGGAAAAGCCCGCCAAGCCGCCGCT
GCCGAATTTGCCGCAGTTTCAGTCGCCAGCTGCTAGTCAGCCGACGCAGA
CGCAGCTGGAACCACTGCCTCCGCCGCCTGTAACGCCAGCCAAGCCTGTT
CCGATGACGCGGACACAGTTCTTCGGGCTGGACAACCTGCCCTCTCCAAC
GGCCGATCGCAAGAGCACCGACAGCATTGGCAGCTTCAAGCTGAAGCCAG
ATGTGCCGCAGAAGCCTCTGCTGCCCAAGCGACCCACCGTGCTGGGCGTG
GGAGTGCCTAAGGCAGATGGAAAGAGCGATGATGAGGGCGGTACCACGCC
CACTCAGGCAACAATTGATAATGGCAATGGCAGTGTGCGATTTAAAACGG
AGCATTTTCTGGACAAGCTGCGTCAGGAGAACGGCGAGACAAACGGAACG
CGAGAGGTGTCGTCGACGACAAAGGAAAACAATCACAACCATGATCCGCC
TGCTACGGCTGCAGATCAAAATCAGCAGCAAGCTCAGCCCCAAGTCACGA
CACCCATCTCTCCGAACTCATTTCAAACGCCCAAGAGGCCAACGGTGCCA
GCGCCGCCACCGCCCACAAATTGGAAGTCCTCGGACTAGAAGCTTTCTAG
ACCAT
BS23658.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RhoGAP92B-RE | 2223 | CG4755-PE | 1..2223 | 17..2239 | 11085 | 99.9 | Plus |
| RhoGAP92B-RA | 2223 | CG4755-PA | 1..2223 | 17..2239 | 11085 | 99.9 | Plus |
| RhoGAP92B-RB | 2220 | CG4755-PB | 1..2220 | 17..2239 | 11005 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RhoGAP92B-RE | 3558 | CG4755-RE | 138..2371 | 7..2240 | 11095 | 99.8 | Plus |
| RhoGAP92B-RA | 3016 | CG4755-RA | 138..2371 | 7..2240 | 11095 | 99.8 | Plus |
| RhoGAP92B-RB | 3013 | CG4755-RB | 138..2368 | 7..2240 | 11015 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19910891..19911859 | 498..1466 | 4845 | 100 | Plus |
| 3R | 32079331 | 3R | 19912311..19913085 | 1466..2240 | 3875 | 100 | Plus |
| 3R | 32079331 | 3R | 19905629..19905888 | 65..324 | 1270 | 99.2 | Plus |
| 3R | 32079331 | 3R | 19908433..19908610 | 323..500 | 890 | 100 | Plus |
| 3R | 32079331 | 3R | 19905301..19905360 | 7..66 | 255 | 95 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:44:34 has no hits.
BS23658.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:18:47 Download gff for
BS23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RhoGAP92B-RA | 173..2395 | 17..2239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:31 Download gff for
BS23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RhoGAP92B-RA | 173..2395 | 17..2239 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:05 Download gff for
BS23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RhoGAP92B-RA | 148..2370 | 17..2239 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:05 Download gff for
BS23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19905311..19905360 | 17..66 | 100 | -> | Plus |
| 3R | 19905631..19905887 | 67..323 | 99 | -> | Plus |
| 3R | 19908434..19908609 | 324..499 | 100 | -> | Plus |
| 3R | 19910893..19911859 | 500..1466 | 100 | -> | Plus |
| 3R | 19912312..19913084 | 1467..2239 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:31 Download gff for
BS23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15731033..15731082 | 17..66 | 100 | -> | Plus |
| arm_3R | 15731353..15731609 | 67..323 | 99 | -> | Plus |
| arm_3R | 15734156..15734331 | 324..499 | 100 | -> | Plus |
| arm_3R | 15736615..15737581 | 500..1466 | 100 | -> | Plus |
| arm_3R | 15738034..15738806 | 1467..2239 | 100 | | Plus |
BS23658.pep Sequence
Translation from 16 to 2238
> BS23658.pep
MKRQFAKIKIAAENLSRSSKSDSKDSELEAIERQVDRYRDTIEKIVRKLP
ALSGGGGSGSGSSEEQDKRTKKNSHYKIAQALDESAKELPKDMPLQKVLA
NCGELEKTMAECIIESELETEAKVVRRLKNILDKEIQEISTLKRNVSRTL
QEYTSLKRSHEAAIRLEEPAAKVNHIKSQQEECELKLEKERDAWAAQMLE
LIAKEDEIVSCIRDYVLNQRNYHERALQHVNASLARIQDTIQGTEKSRFG
TSLKEHLTSTNREISYIVELCCCCLLEHGLEEEGLLRVGCASTKLRRMKH
ALEAQHVKTPLPLDYQDPHVIGSILKLYLRELPEPLLTYNLYKDFIRIAE
RHSEAERKTEIKAILTKLPKENYANLRYLTRFLSIVQQRSALNKMSSQNL
AIVMSPNMLWPRIDKSSNAPADYIGQVNSSSAANIIVELLISQWDYFFIG
EVEFYLTLQKQKLFVEGKSKSNSSNENLDRNDSEVMESPRYGTLRRQKAN
APSPPTTNGNGIIMTTSQTSHRPHAKELFPQQTPEKQEKPAKPPLPNLPQ
FQSPAASQPTQTQLEPLPPPPVTPAKPVPMTRTQFFGLDNLPSPTADRKS
TDSIGSFKLKPDVPQKPLLPKRPTVLGVGVPKADGKSDDEGGTTPTQATI
DNGNGSVRFKTEHFLDKLRQENGETNGTREVSSTTKENNHNHDPPATAAD
QNQQQAQPQVTTPISPNSFQTPKRPTVPAPPPPTNWKSSD*
BS23658.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:15:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RhoGAP92B-PE | 740 | CG4755-PE | 1..740 | 1..740 | 3816 | 100 | Plus |
| RhoGAP92B-PA | 740 | CG4755-PA | 1..740 | 1..740 | 3816 | 100 | Plus |
| RhoGAP92B-PB | 739 | CG4755-PB | 1..739 | 1..740 | 3799 | 99.9 | Plus |
| RhoGAP92B-PD | 648 | CG4755-PD | 1..648 | 93..740 | 3364 | 100 | Plus |
| RhoGAP92B-PC | 543 | CG4755-PC | 1..543 | 198..740 | 2842 | 100 | Plus |
