Clone BS23663 Report

Search the DGRC for BS23663

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:236
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG14662-RA
Protein status:BS23663.pep: full length peptide match
Sequenced Size:1685

Clone Sequence Records

BS23663.complete Sequence

1685 bp assembled on 2011-02-15

GenBank Submission: KX802018

> BS23663.complete
GAAGTTATCAGTCGACATGTTCAAGTCCAAGTCCTTCGATTTGGTCATTG
AGGAAAAGACAAAGAAACCGGAACGGCTCTACCAACCTCGTCGGATGCGA
TGGCTTAAATATATCATCCTGCCGGCAGTCTTCTCCTTTGCGCTTCTGCT
GATCCTGGTCAATGTGGACTTCTCCGATAATAGTGAGGATTCCACGCATC
TGGGCAATGACACATCGCTCATTATATCTGGCTATGGATTTGAAAATAAC
ACACTGCGCCGGGGATTTTTCTCCGGAGGAATTGCATTGCATAGCCTTGT
CATCGAGAACTGCACCATAGTTCATATCAACGACGCAGCTTTTAATCAGG
AAAGCACTGTGAACATAACAAGCCTGCAGCTCATTAATGTGCAATTGGAA
AACTTGACTGAATCTGCCCTGGAAGGTCTTCAAAAGCTTCAGAACTTTAC
TCTAGTCAATGAAAATAATCACTTCAGGCCATTTGGATTCCTCTCAGCTG
TGGCTGAATCGTTAGTCAGTGCGGAAATCCACCAGTCACTAGCCGCGGCA
ATATCGTATTCAGTGTGCGATTTTTTGGGATCCCGGAATTTCCCACAGTT
GAAATATTTAGATCTGAGTGGCACACACTTGGACAAAAGCCTTATTAAAG
AGTCCTTTGACAATCTGCCCGCGTTGGAACAACTACTTCTAAGGAACTGT
GGGTTGGGCAACATCGAGTGGGAAATCGTGAGGCCAAGACTCAAATTGTT
GCACTATTTGGACTTGGGTGGAGCTCAAAAGACGGGCAACTATGAACATC
AGTTGGACGTATCCGCGTTCTCTCCTGAGACAACTACTAACGCTGAAGAG
ATATCTACTATCCTAGCGAAGAGAGCGATGGCTCCAGAAGTAGTGGGCAC
CACTACACTAGGACCTACTACTTCCATAGAAATTTCACCACCATCAACAC
AAAGTACAACAACACCCAAAGAAGAAAGTACATCTATGACAGAAACAACG
ATATTAACAACACCATCGCCAAAATGCGAAGAGGAACTTTGCCAGGATCT
AGAGTGCTCCAGAATTACCACCGATACGGTTGCATCTGCAGATCTGGGAA
AATCGTCGTGCCAGGATGGTTTACTGGTGGAGATCTGCGAATCGACTTGC
ACCACTCCCACATTCTTCTGTGTGATATTAGGCGAGAACTTTACCTCCGC
ATCCAACTGTTGTTCCCACCATACCATGCGATGTGTGGTCTCAGCCCAGG
TCTCCTGGTTCGAGGACCACAGCGGACTGGTCATTGGCTTGGGAGTGGGT
CTCCTCTTCATCGGCAGCTTCCTCGGCATGCTCATCGTCTTCGGAACCCT
GCGCCTGAATCCATCCTGGTTGCGAGGCAATAAGCGGCGGGAGTCGAATA
CGATAGGACTGATTCAGGGAAGATTTGAGAAGGACCCGTATGAGCAAGTG
GGAGGTCCGATTGCTACTATTGACAACAACGAGTACGTCACCGCCTATCA
CCGTTACCTGGAGCAAGCAAATCACCGCCCCACGGAGTCGAACAAGTATA
TCCGCCCGCCCAGGGACAGGGCTCCTTCTGTTCCGCCCTCCAGCGATTAT
CCATTACCACTTCCGGCAAGGAATTGCAACGTATACGAGAGCTGTGAACT
GTACGAGGAACTTCCGTAGAAGCTTTCTAGACCAT

BS23663.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:43:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14662-RA 1653 CG14662-PA 1..1653 17..1669 8220 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:43:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14662-RA 2000 CG14662-RA 170..1823 17..1670 8225 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4982628..4984063 1452..17 7135 99.8 Minus
3R 32079331 3R 4982176..4982394 1670..1452 1095 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:43:19 has no hits.

BS23663.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:31 Download gff for BS23663.complete
Subject Subject Range Query Range Percent Splice Strand
CG14662-RA 175..1822 22..1669 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:21 Download gff for BS23663.complete
Subject Subject Range Query Range Percent Splice Strand
CG14662-RA 175..1822 22..1669 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:30:37 Download gff for BS23663.complete
Subject Subject Range Query Range Percent Splice Strand
CG14662-RA 175..1822 22..1669 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:30:37 Download gff for BS23663.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4982177..4982393 1453..1669 100 <- Minus
3R 4982628..4984058 22..1452 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:21 Download gff for BS23663.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 807899..808115 1453..1669 100 <- Minus
arm_3R 808350..809780 22..1452 99   Minus

BS23663.pep Sequence

Translation from 16 to 1668

> BS23663.pep
MFKSKSFDLVIEEKTKKPERLYQPRRMRWLKYIILPAVFSFALLLILVNV
DFSDNSEDSTHLGNDTSLIISGYGFENNTLRRGFFSGGIALHSLVIENCT
IVHINDAAFNQESTVNITSLQLINVQLENLTESALEGLQKLQNFTLVNEN
NHFRPFGFLSAVAESLVSAEIHQSLAAAISYSVCDFLGSRNFPQLKYLDL
SGTHLDKSLIKESFDNLPALEQLLLRNCGLGNIEWEIVRPRLKLLHYLDL
GGAQKTGNYEHQLDVSAFSPETTTNAEEISTILAKRAMAPEVVGTTTLGP
TTSIEISPPSTQSTTTPKEESTSMTETTILTTPSPKCEEELCQDLECSRI
TTDTVASADLGKSSCQDGLLVEICESTCTTPTFFCVILGENFTSASNCCS
HHTMRCVVSAQVSWFEDHSGLVIGLGVGLLFIGSFLGMLIVFGTLRLNPS
WLRGNKRRESNTIGLIQGRFEKDPYEQVGGPIATIDNNEYVTAYHRYLEQ
ANHRPTESNKYIRPPRDRAPSVPPSSDYPLPLPARNCNVYESCELYEELP
*

BS23663.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG14662-PA 550 CG14662-PA 1..550 1..550 2863 100 Plus