Clone BS23664 Report

Search the DGRC for BS23664

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:236
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG13581-RA
Protein status:BS23664.pep: full length peptide match
Sequenced Size:659

Clone Sequence Records

BS23664.complete Sequence

659 bp assembled on 2011-01-25

GenBank Submission: KX804365

> BS23664.complete
GAAGTTATCAGTCGACATGCAGCGACTAGCTTCAGTTAATTCAAGAAATA
TAAGGCCATCTATTTCCGCGTTGCACACGGAGAAGCCCCACAATGTGGCC
AAGACTTCTCCAGCTTCTTCTAATCTATCAGATCATACAATTCCCGAGAA
GACAGCGCAGAAATCGGAATCGAAACCGAAAACGAAATCAACTCAAAATC
AAAGTGCAGGACTAGCGAGTGCTAGGTCACAACTGGTGATAAAGTCCAGT
GTGGGTGCTACTCCCAGGCCAGGATCAACGCCAGGCTCTGGAGCCACTAG
GAACACTGCCTCCAGTAGGACCCAGCACTTTTGCATTCCCGTGCGGAGCT
GTTATACTGTGACCAGCCGCACTCGCCGCTCCTCCGAGCACGCGGCCTTC
CTGTACCATCTGTCCCAGTTGGAGCAGACCGGATTTGGCAAGAGTGCGGT
GGATCCCATGAAGGCCGTGCCGGCGGCGGAGCTGCAACTGCTGCAGAGTG
GCCAGAGGACCACCTACCTGGAGCGGCGGTACGAACGCAGCCCAGACGAC
AAGTACAACTATCCGGAGGCCACCAGCTGGCGATATGGGTGGTTCCACCG
CGAGTCAGATCTCCTGCAGAAGCGCGTGCCCAGGCGAGATTAGAAGCTTT
CTAGACCAT

BS23664.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13581-RA 627 CG13581-PA 1..627 17..643 3105 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG13581-RA 837 CG13581-RA 94..722 17..645 3115 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24506963..24507591 17..645 3115 99.7 Plus
Blast to na_te.dros performed on 2014-11-26 15:52:14 has no hits.

BS23664.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:18:06 Download gff for BS23664.complete
Subject Subject Range Query Range Percent Splice Strand
CG13581-RA 89..715 17..643 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:05:25 Download gff for BS23664.complete
Subject Subject Range Query Range Percent Splice Strand
CG13581-RA 94..720 17..643 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:44 Download gff for BS23664.complete
Subject Subject Range Query Range Percent Splice Strand
CG13581-RA 94..720 17..643 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:44 Download gff for BS23664.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24506963..24507589 17..643 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:05:25 Download gff for BS23664.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20394486..20395112 17..643 99   Plus

BS23664.pep Sequence

Translation from 16 to 642

> BS23664.pep
MQRLASVNSRNIRPSISALHTEKPHNVAKTSPASSNLSDHTIPEKTAQKS
ESKPKTKSTQNQSAGLASARSQLVIKSSVGATPRPGSTPGSGATRNTASS
RTQHFCIPVRSCYTVTSRTRRSSEHAAFLYHLSQLEQTGFGKSAVDPMKA
VPAAELQLLQSGQRTTYLERRYERSPDDKYNYPEATSWRYGWFHRESDLL
QKRVPRRD*

BS23664.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG13581-PA 208 CG13581-PA 1..208 1..208 1073 100 Plus