BS23670.complete Sequence
719 bp assembled on 2011-01-25
GenBank Submission: KX806048
> BS23670.complete
GAAGTTATCAGTCGACATGGAGTACAATCGCCAGCCGTGTCCCATTAGGA
TTGTGGAGGATTGCGGATGTGCCTTCATGATGGGCACCATCGGTGGTTCG
CTGTTCGAGTTCCTCAAGGGTTTCCGTAACGCTCCTACCGGATTGCAGCG
CAGACTTTATGGTGGCATTGATTTGGTGAAGATGAGAACGCCGTCCATTG
CCGGCAGCTTTGCCGTTTGGGGTGCCACTTTCAGCACAGTGGATTGCGCC
CTGGTCCACTATCGCCAGAGGGAGGATGCCTGGAACTCGATACTCAGTGG
AGCGGCCACTGGTGGGATATTGGCAGCCCGTAATGGCATTCGGGCCATGG
CCAACAGTGCTCTGGTGGGCTGTCTGGTGCTGGCCATGATTGAAGGAGCC
GGTGCAGCAGTGGCCACCATTAATGCAGCCGACAAAGGTGCAGGGATAGT
CATCAAGCCGCAGCGGGCCCAGTGGGAGGCCATACTGGAGACTATTGATC
CGAAGAGAGCGTCATCCACTCAAGATTTCGCACTGGCGGAGTTTGAACGG
GTGCTGGACAAATGTCGGGCGAGCAGGGAACCAAATTTACTTCAGGACAT
TCCGGTTAAGAGTCACGAGCGAGATTCCAAACAGAAGCCATTTTATTCCC
TCTTGGATCTGGTGAAACTGTCCCAGATGTTCTAGAAGCTTTCTAGACCA
TTCGTTTGGCCCTTAAAGG
BS23670.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17a1-RB | 669 | CG10090-PB | 1..669 | 17..685 | 3345 | 100 | Plus |
Tim17a1-RA | 669 | CG10090-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
Tim17a2-RA | 675 | CG14666-PA | 1..411 | 17..427 | 870 | 80.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17a1-RB | 897 | CG10090-RB | 95..764 | 16..685 | 3350 | 100 | Plus |
Tim17a1-RA | 1014 | CG10090-RA | 95..764 | 16..685 | 3350 | 100 | Plus |
Tim17a2-RA | 991 | CG14666-RA | 180..592 | 15..427 | 880 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12363917..12364586 | 685..16 | 3350 | 100 | Minus |
3R | 32079331 | 3R | 5258735..5259147 | 427..15 | 880 | 80.9 | Minus |
2L | 23513712 | 2L | 15485053..15485138 | 230..315 | 190 | 81.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:50:09 has no hits.
BS23670.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:18:05 Download gff for
BS23670.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17a1-RA | 96..768 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:05:04 Download gff for
BS23670.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17a1-RA | 96..768 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:08 Download gff for
BS23670.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tim17a1-RA | 96..768 | 17..691 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:08 Download gff for
BS23670.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12363913..12364585 | 17..691 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:05:04 Download gff for
BS23670.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8189635..8190307 | 17..691 | 99 | | Minus |
BS23670.pep Sequence
Translation from 16 to 684
> BS23670.pep
MEYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGG
IDLVKMRTPSIAGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGG
ILAARNGIRAMANSALVGCLVLAMIEGAGAAVATINAADKGAGIVIKPQR
AQWEAILETIDPKRASSTQDFALAEFERVLDKCRASREPNLLQDIPVKSH
ERDSKQKPFYSLLDLVKLSQMF*
BS23670.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tim17a1-PB | 222 | CG10090-PB | 1..222 | 1..222 | 1142 | 100 | Plus |
Tim17a1-PA | 222 | CG10090-PA | 1..222 | 1..222 | 1142 | 100 | Plus |
Tim17a2-PA | 224 | CG14666-PA | 1..223 | 1..221 | 720 | 63.1 | Plus |
Tim17b-PB | 173 | CG40451-PB | 3..138 | 2..137 | 481 | 64.7 | Plus |
Tim17b-PA | 173 | CG40451-PA | 3..138 | 2..137 | 481 | 64.7 | Plus |