BS23681.complete Sequence
731 bp assembled on 2011-02-04
GenBank Submission: KX805044
> BS23681.complete
GAAGTTATCAGTCGACATGCCGAAGAAGGGAAAAGACAAGGGGAAGAAAG
GAAAGAAAAGTGTTTTCAGAGCCAAGTCTACAGTGGTGCCCACAGCACCT
CCAGAACCAGTGTTCGATAGAAATTTGCCCGTTTTCTCCTTCGATCTTGT
TATCACCCGACTGGAGGTAAAGGGTGTGGTCCTGGCCGACGCAAGAAAAC
TGCTGGTGAAGGTCAAATTTGGTGGCAACAATCTCAGTCTTACGGCTAGT
AGAACCAATGTGAGCGAGTTCAAGCCGAATGCCAGTCACACCTTTCAGGC
GGAGCCACCGAATCTAGCCCAGACAGTCGAAGAAAATGGCATAGACTTTG
AGGTGGTGTACGATGAGCAAGTTGTTGGCTTGGGTAAACTGAGCCTGCCC
AAAAGATTAAGCACAAGAATAAAGCTGGACATGAAGGCATTCTCCTACAC
GAGCACTTGTCCCCTGGAAATGGAGGGGAAGCCAGTTGGCGCATTAGAGT
TCCTTTGCAAGCTGTTCATCAAATGTGGCGATTATGCCAGAGAGGGCGAA
ACTTGCCCCAATTTGGACAGGAACCTTAGCCCAAGGGACATAGTATTTGT
GGTCGGCAAATCGCAGGCCAATACCAGCTGCTGCGATCCCTGTCGAGATG
CTCTGGAAATCGAGGCGAGAAAACAGAAAGACTACAGTATTCAATCGAGT
TCTAGTCGAAAATAGAAGCTTTCTAGACCAT
BS23681.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:15:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3199-RA | 699 | CG3199-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3199-RA | 860 | CG3199-RA | 137..836 | 17..716 | 3500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14162845..14163368 | 17..540 | 2620 | 100 | Plus |
| 3R | 32079331 | 3R | 14163423..14163601 | 538..716 | 895 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:15:36 has no hits.
BS23681.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:50 Download gff for
BS23681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3199-RA | 127..818 | 17..708 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:20 Download gff for
BS23681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3199-RA | 137..828 | 17..708 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:21:59 Download gff for
BS23681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3199-RA | 137..828 | 17..708 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:21:59 Download gff for
BS23681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14163426..14163593 | 541..708 | 100 | | Plus |
| 3R | 14162845..14163368 | 17..540 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:20 Download gff for
BS23681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9988567..9989090 | 17..540 | 100 | -> | Plus |
| arm_3R | 9989148..9989315 | 541..708 | 100 | | Plus |
BS23681.pep Sequence
Translation from 16 to 714
> BS23681.pep
MPKKGKDKGKKGKKSVFRAKSTVVPTAPPEPVFDRNLPVFSFDLVITRLE
VKGVVLADARKLLVKVKFGGNNLSLTASRTNVSEFKPNASHTFQAEPPNL
AQTVEENGIDFEVVYDEQVVGLGKLSLPKRLSTRIKLDMKAFSYTSTCPL
EMEGKPVGALEFLCKLFIKCGDYAREGETCPNLDRNLSPRDIVFVVGKSQ
ANTSCCDPCRDALEIEARKQKDYSIQSSSSRK*
BS23681.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3199-PA | 232 | CG3199-PA | 1..232 | 1..232 | 1196 | 100 | Plus |
| CG14355-PA | 1024 | CG14355-PA | 5..212 | 13..216 | 353 | 38.9 | Plus |
| CG31533-PA | 844 | CG31533-PA | 7..171 | 40..205 | 185 | 28.3 | Plus |
