BS23686.complete Sequence
788 bp assembled on 2011-02-04
GenBank Submission: KX801779
> BS23686.complete
GAAGTTATCAGTCGACATGAGAATGGACAAGTCGGAGAAACGCTCTAATC
TTGCTGATAACTTCCTGTATATGTTGGAGTTCATGGTGGACGATCTGCTG
ATCACTCGTCCCAACCTCTGCGCTCCGGAGGAGTATCCCACTTGCACGGA
GATCACGTTCCGTTCGGTTTTCCTGAACATTCGCGATCGGGAGAACGGAA
GCTGTGTCAACCCCTGTTCGCCCAAGTGCGGCAAGTGCACCCTCTTCACG
CTGGAATCGCCGATCACGGACGAGGACGTGATGCACATTCACGTTTACAA
GAAGCGCACGGAGAGCTGCAAGTTCCTGCTCGGGCTGACCGAGCTGCCGA
TGAAGCCGATCTTCGACAGGGTAAAGAAGGAGTTCTATTCACAGAACATA
AACTGGGAGAGTAATGTCGAGTCCCATTTGTCGCGAATGCCCAAGCTGAG
GGGCCCCTGCAAGAAGGCCAATGACTGTGTGTGCTACGAGAGGAATAGGG
AGCGGCGCGAACAGTGGTGTCCCACCTCAGAGCTGACCAAGCGGATGCTG
CCGCTCTTCAACCTCTGCAAGATGCAGACGGGCAATATAGTGCTGATCCT
GAGACTGGTGTGCAATGGGCCCTCTGTGGTATCCTCCTTCCCCGTCCAGA
GACCAGTGTGCAAGGATCCCTGCAACTGTTGCTGTCCTTGCCCGCCCACT
TGGCCTGCTCCCTGTTCGTCGCCATTCGATCCCTGCGATCCTTGCAAGAC
CGTGCCAGCCAAGAAGACATGAAAGCTTTCTAGACCAT
BS23686.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:16:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9129-RA | 756 | CG9129-PA | 1..756 | 17..772 | 3705 | 99.3 | Plus |
| CG9130-RB | 1554 | CG9130-PB | 82..402 | 59..376 | 715 | 82.2 | Plus |
| CG9130-RA | 1554 | CG9130-PA | 82..402 | 59..376 | 715 | 82.2 | Plus |
| CG9130-RB | 1554 | CG9130-PB | 506..650 | 474..618 | 365 | 83.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:16:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9129-RA | 1083 | CG9129-RA | 182..937 | 17..772 | 3705 | 99.3 | Plus |
| CG9133-RD | 3109 | CG9133-RD | 237..557 | 59..376 | 715 | 82.2 | Plus |
| CG9133-RC | 3036 | CG9133-RC | 237..557 | 59..376 | 715 | 82.2 | Plus |
| CG9133-RD | 3109 | CG9133-RD | 661..805 | 474..618 | 365 | 83.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1250877..1251632 | 17..772 | 3705 | 99.3 | Plus |
| 3L | 28110227 | 3L | 1252248..1252568 | 59..376 | 715 | 82.2 | Plus |
| 3L | 28110227 | 3L | 1252672..1252816 | 474..618 | 365 | 83.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:16:26 has no hits.
BS23686.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:52 Download gff for
BS23686.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9129-RA | 182..936 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:49 Download gff for
BS23686.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9129-RA | 182..936 | 17..771 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:22:18 Download gff for
BS23686.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9129-RA | 182..936 | 17..771 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:22:18 Download gff for
BS23686.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1250877..1251631 | 17..771 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:49 Download gff for
BS23686.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1250877..1251631 | 17..771 | 99 | | Plus |
BS23686.pep Sequence
Translation from 16 to 771
> BS23686.pep
MRMDKSEKRSNLADNFLYMLEFMVDDLLITRPNLCAPEEYPTCTEITFRS
VFLNIRDRENGSCVNPCSPKCGKCTLFTLESPITDEDVMHIHVYKKRTES
CKFLLGLTELPMKPIFDRVKKEFYSQNINWESNVESHLSRMPKLRGPCKK
ANDCVCYERNRERREQWCPTSELTKRMLPLFNLCKMQTGNIVLILRLVCN
GPSVVSSFPVQRPVCKDPCNCCCPCPPTWPAPCSSPFDPCDPCKTVPAKK
T*
BS23686.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9129-PA | 251 | CG9129-PA | 1..251 | 1..251 | 1406 | 100 | Plus |
| CG9130-PB | 517 | CG9130-PB | 15..282 | 2..243 | 891 | 61.6 | Plus |
| CG9130-PA | 517 | CG9130-PA | 15..282 | 2..243 | 891 | 61.6 | Plus |
