BS23689.complete Sequence
746 bp assembled on 2011-02-04
GenBank Submission: KX805002
> BS23689.complete
GAAGTTATCAGTCGACATGCTTAGTTCAAAAAGTGACACTTCTGGAGACG
ATATCTCTATAACTGCACAAGCAGAAAAAAGAGTGGATGATAGCATCAGA
GCGCCATCTATTGGCTGGAATGCTGAGCACAAAGATGTTCAGATTCCAAG
GGACCAACTAACCCACAGGCAGATCAGCAAGTGCAATTTGTTTGAGGAAT
ACATCAAGCTCCCAAAGAGTGAATATGGACAAACAAGCCGCATGAAGCGA
TTCCGATCCGAAGAGTTAGCTATTAAGCAAGAAGATCAAATCGTGGAGCA
TAGATCATCGAGTCTTTCGCGGCTATCGGATGTCACAATCAAGCCCACCT
GCGAGGTGAGTAGTCAGACTTCGTGGACAGCAGCGGACGAGAGTAATATG
AATAGCAAGGATTTGGAGGCGAAGCTGGCGGCTGTACGCGGCGGTGGTAT
CGATCTCGAAACGGACAAGCCCAGCAAGATCCAGCAGCACACGATCCACA
TCGAGGTGGAGTCGGTGACATCGGCCACGGCTATGCAAAGACCCCCACTG
CACCAAAGGATGTGGCAGGTCCTTGTGCAGACGGCGGATACGATTGTCGC
ATTCGCCTCTATAATCGGCGAGAATTTAACAGTGGCACTCTTCATTGTCC
TGTGCCTGTGGTGCCTTTACCTCTTACTAAGCCACTTTTATGGCAACTTG
CAGACCAATGTCGGCATGCCGTCCAAATAAAAGCTTTCTAGACCAT
BS23689.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:09:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-RA | 714 | CG16852-PA | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:09:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-RA | 835 | CG16852-RA | 48..763 | 15..730 | 3580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:09:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13541124..13541574 | 280..730 | 2255 | 100 | Plus |
2L | 23513712 | 2L | 13540798..13541064 | 15..281 | 1335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:09:58 has no hits.
BS23689.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-04 12:13:27 Download gff for
BS23689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 50..761 | 17..728 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:48:56 Download gff for
BS23689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 50..761 | 17..728 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:53:07 Download gff for
BS23689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16852-RA | 50..761 | 17..728 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:53:07 Download gff for
BS23689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13540800..13541064 | 17..281 | 100 | -> | Plus |
2L | 13541126..13541572 | 282..728 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:48:56 Download gff for
BS23689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13540800..13541064 | 17..281 | 100 | -> | Plus |
arm_2L | 13541126..13541572 | 282..728 | 100 | | Plus |
BS23689.pep Sequence
Translation from 16 to 729
> BS23689.pep
MLSSKSDTSGDDISITAQAEKRVDDSIRAPSIGWNAEHKDVQIPRDQLTH
RQISKCNLFEEYIKLPKSEYGQTSRMKRFRSEELAIKQEDQIVEHRSSSL
SRLSDVTIKPTCEVSSQTSWTAADESNMNSKDLEAKLAAVRGGGIDLETD
KPSKIQQHTIHIEVESVTSATAMQRPPLHQRMWQVLVQTADTIVAFASII
GENLTVALFIVLCLWCLYLLLSHFYGNLQTNVGMPSK*
BS23689.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:03:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16852-PA | 237 | CG16852-PA | 1..237 | 1..237 | 1209 | 100 | Plus |