Clone BS23691 Report

Search the DGRC for BS23691

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:236
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG1409-RB
Protein status:BS23691.pep: gold
Sequenced Size:542

Clone Sequence Records

BS23691.complete Sequence

542 bp assembled on 2011-02-04

GenBank Submission: KX805409

> BS23691.complete
GAAGTTATCAGTCGACATGATTTCGGAGATCTCTACACAATCGCGAGCAA
AATTCCCTTTAGACAAGCAGAAAATGGCACGGTACTTAGCGCAAATCATC
ATTTTGGGTGCCCAGCTGGTTGGCCGGGCGCTGGTAAAGACGATGCGCCA
GGAGCTGCAGGCCTTCGAGGATGCGGCACGCCTTCAGGAAACGCTAAAGG
CCAACGATCCCAACAGCGGCAGGAGTGCGGTGGCCAAGACAATGACCCTG
GCGGAGGCCCAGCAGATTCTCGATGTGAGTGACCTTACCAACCGCCAAGC
GATAGATACGCACTACCAGCACTTGTTTCGTGTGAACGACAAATCCACCG
GCGGTAGCTTCTACATTCAGTCGAAAGTCTTTCGGGCCAAGGAGCGAATC
GATCAGGAACTGGAACGGACGGAGCTGTTGGTCAAGACCGACGACTCCCA
TTCAATCCTACCAACGCCACCGGAATCCTCGCAATTCCAATGCGAGAACA
AAGAGCCGGGTCAGAAGAGCCGATGAAAGCTTTCTAGACCAT

BS23691.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG1409-RB 453 CG1409-PB 1..453 74..526 2220 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG1409-RB 622 CG1409-RB 1..510 17..526 2505 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7858173..7858682 17..526 2505 99.4 Plus
Blast to na_te.dros performed on 2014-11-27 01:14:50 has no hits.

BS23691.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:49 Download gff for BS23691.complete
Subject Subject Range Query Range Percent Splice Strand
CG1409-RB 1..509 17..525 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:48:59 Download gff for BS23691.complete
Subject Subject Range Query Range Percent Splice Strand
CG1409-RB 1..509 17..525 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:21:39 Download gff for BS23691.complete
Subject Subject Range Query Range Percent Splice Strand
CG1409-RB 1..509 17..525 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:21:39 Download gff for BS23691.complete
Subject Subject Range Query Range Percent Splice Strand
X 7858173..7858681 17..525 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:48:59 Download gff for BS23691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7752206..7752714 17..525 99   Plus

BS23691.pep Sequence

Translation from 16 to 525

> BS23691.pep
MISEISTQSRAKFPLDKQKMARYLAQIIILGAQLVGRALVKTMRQELQAF
EDAARLQETLKANDPNSGRSAVAKTMTLAEAQQILDVSDLTNRQAIDTHY
QHLFRVNDKSTGGSFYIQSKVFRAKERIDQELERTELLVKTDDSHSILPT
PPESSQFQCENKEPGQKSR*

BS23691.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG1409-PB 150 CG1409-PB 1..150 20..169 749 100 Plus
blp-PB 141 CG5268-PB 1..116 20..136 305 55.6 Plus
blp-PA 141 CG5268-PA 1..116 20..136 305 55.6 Plus