Clone BS23694 Report

Search the DGRC for BS23694

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:236
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG12307-RA
Protein status:BS23694.pep: full length peptide match
Sequenced Size:581

Clone Sequence Records

BS23694.complete Sequence

581 bp assembled on 2011-03-18

GenBank Submission: KX800930

> BS23694.complete
GAAGTTATCAGTCGACATGAAAAACTCAACTGTGCAAGACAGTTCACCGC
AAGTGCCACAGAATGGCATGGTCACCTATGGCAGCGGGCTCGTCTTTGGC
GGGAAAGTTTATCCGGTATTGGTGGACGGAAAGCCAATACAGCCACCCTT
AGGTGCTCATCAGGCAGCAATGCAACAGCGCATGCAGATGCAGCAGGTTC
AGCCACAGGCGCCACATACCAACTGCCCCAAGTCCATTGTCCAACAACCT
ATATATCAACGAATGGAGACCCGGTATCCTGCGCCCTCATACATGTCCAA
GCCAAGCCAACAGAGCTCTGTGAGTTGTCCTGGCCCAGTCATGGTGCAGC
AGCACTCGCCGTCTAACAATCTGGCGATGATGCAACCGTTGCAGGCGCAG
ATTTTACAGCGCCAGCAAATGCAAACCTCCATGGGCAGTCCTTGCGGCTA
CTACAACCTGCCAACGAATGCGGGTGGTGATTCCTGCGGCTGGGACGGCT
ATGCCATGATGCAGCCAATGGATGCCAACAAGCCGTATACCTTTGGCTGG
AGTCTTACCGATTGAAAGCTTTCTAGACCAT

BS23694.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:32:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-RA 549 CG12307-PA 1..549 17..565 2715 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-RA 680 CG12307-RA 72..620 17..565 2715 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11651391..11651939 565..17 2715 99.6 Minus
Blast to na_te.dros performed on 2014-11-26 14:32:38 has no hits.

BS23694.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:11:55 Download gff for BS23694.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 72..619 17..564 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:54 Download gff for BS23694.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 72..619 17..564 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:07 Download gff for BS23694.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 72..619 17..564 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:07 Download gff for BS23694.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11651392..11651939 17..564 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:54 Download gff for BS23694.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11651392..11651939 17..564 99   Minus

BS23694.pep Sequence

Translation from 16 to 564

> BS23694.pep
MKNSTVQDSSPQVPQNGMVTYGSGLVFGGKVYPVLVDGKPIQPPLGAHQA
AMQQRMQMQQVQPQAPHTNCPKSIVQQPIYQRMETRYPAPSYMSKPSQQS
SVSCPGPVMVQQHSPSNNLAMMQPLQAQILQRQQMQTSMGSPCGYYNLPT
NAGGDSCGWDGYAMMQPMDANKPYTFGWSLTD*

BS23694.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-PA 182 CG12307-PA 1..182 1..182 987 100 Plus