BS23695.complete Sequence
569 bp assembled on 2011-01-25
GenBank Submission: KX803555
> BS23695.complete
GAAGTTATCAGTCGACATGACTGAGAGCATTGTGTGTCACAAGTGCCAGG
AGGCCATCACCAAGCGTATGATCACCGCCCTGGGCAAGACGTGGCACCCG
GAGCACTTCCTGTGCCACCACTGCGATGAGCAGATCCTGGATGCCACCTT
CAATGTTCAGAGCGGAGAACCAGTGTGCAACAAGTGCTTCGTGGAGCGGT
ACACCTACACCTGTGCCGGCTGCAAGAAGCCGATCCTTGAAAAAACCATC
TGCGCCATGGGGGAGAGGTGGCACGAAGCTTGCTTTTGCTGCGGCGGTGC
CTGCAAAAAGCCGCTCGCCAGTCAAACGTTCTATGAGCGCGACGGCAAGC
CCTATTGCAAACAGGATTACGAGAACCTCTTTGCTGCCAGGTGCGCCAAG
TGCGAGAAGCCTATAACGGACTCAGCGGTGCTCGCCATGAACGTGAAGTG
GCATCGCAATTGCTTCCAGTGCAACAAATGCGAGAATCCTATAACCTCGC
AGACTTTTACCATCGACGGGGACAAGCCCGTGTGCCCCGCCTGCAATTGC
TAAAAGCTTTCTAGACCAT
BS23695.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31624-RC | 537 | CG31624-PC | 1..537 | 17..553 | 2670 | 99.8 | Plus |
| CG31624-RB | 537 | CG31624-PB | 1..537 | 17..553 | 2670 | 99.8 | Plus |
| CG31624-RA | 537 | CG31624-PA | 1..537 | 17..553 | 2670 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31624-RC | 979 | CG31624-RC | 87..623 | 17..553 | 2670 | 99.8 | Plus |
| CG31624-RB | 830 | CG31624-RB | 80..616 | 17..553 | 2670 | 99.8 | Plus |
| CG31624-RA | 888 | CG31624-RA | 189..725 | 17..553 | 2670 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21199401..21199937 | 553..17 | 2670 | 99.8 | Minus |
| 2L | 23513712 | 2L | 21201716..21202252 | 553..17 | 2550 | 98.3 | Minus |
| 2L | 23513712 | 2L | 19404347..19404402 | 124..69 | 190 | 89.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:45:58 has no hits.
BS23695.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:18:02 Download gff for
BS23695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31624-RB | 80..614 | 17..551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:25 Download gff for
BS23695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31624-RA | 189..723 | 17..551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:39 Download gff for
BS23695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31624-RA | 189..723 | 17..551 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:39 Download gff for
BS23695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21199403..21199937 | 17..551 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:25 Download gff for
BS23695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21199403..21199937 | 17..551 | 99 | | Minus |
BS23695.pep Sequence
Translation from 16 to 552
> BS23695.pep
MTESIVCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSG
EPVCNKCFVERYTYTCAGCKKPILEKTICAMGERWHEACFCCGGACKKPL
ASQTFYERDGKPYCKQDYENLFAARCAKCEKPITDSAVLAMNVKWHRNCF
QCNKCENPITSQTFTIDGDKPVCPACNC*
BS23695.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31624-PC | 178 | CG31624-PC | 1..178 | 1..178 | 1034 | 100 | Plus |
| CG31624-PB | 178 | CG31624-PB | 1..178 | 1..178 | 1034 | 100 | Plus |
| CG31624-PA | 178 | CG31624-PA | 1..178 | 1..178 | 1034 | 100 | Plus |
| CG31988-PB | 178 | CG31988-PB | 1..178 | 1..178 | 1001 | 96.1 | Plus |
| CG31988-PA | 178 | CG31988-PA | 1..178 | 1..178 | 1001 | 96.1 | Plus |
