Clone BS23696 Report

Search the DGRC for BS23696

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:236
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG32117-RA
Protein status:BS23696.pep: full length peptide match
Sequenced Size:683

Clone Sequence Records

BS23696.complete Sequence

683 bp assembled on 2011-03-18

GenBank Submission: KX802755

> BS23696.complete
GAAGTTATCAGTCGACATGACAAGTTTTCAAATTCGATTGATTTCGGACC
AAAATCTGGTCCTCGTGGACGCCCTACATCACGAGTCGGAGATTTTTGTA
CCCCAGATATACAACAATGACATCGTACTGTGGAACATCATACGAGATCG
TCGGTCGAATCCAAAAGTCGAATTTTGTGAAGAGCCTGTCCAGGGTCAAG
GCAATGGTCAGATCTGCCAGCGCCCACAGATCCAGCCTCGGATAACGACG
GCGACGGCAGGTCTGGCCCCCTGGGCGGCGTCCATCGATGGCAGTCCATT
TAGAAGAGTTGCGGAGGAAGGTTCCCGGTGTCCACTGTTTTCACTCAAGC
TCATCTCGAATGGCAGCGTAGTGCTCGTAGAATGTAATGTCCACGAATCG
GAGATCTTTCTACCGCAGATTTGCGGCCAGTACATAGCCATGAAACGCAT
CACCGGCCACGAACTTTTACTGCCATCCAAACCGAAGATCTCTGCCATCC
AACCAGCTAAGACCAATTGTTTACGCATTCAACCGACTCGCTTCTTTTCA
AAAACGACCAACTTGGATAATCAGGCAAAAAAACGAAGGAAGCGCAAAAG
TCAAGAGCAAACCAATCACTCTGGAGCTGGGGATCAACGAACGTTGAAGT
CCGTGAAACGATAAAAGCTTTCTAGACCATTCT

BS23696.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32117-RA 648 CG32117-PA 1..648 17..664 3210 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32117-RA 787 CG32117-RA 40..687 17..664 3210 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12903025..12903672 664..17 3210 99.7 Minus
Blast to na_te.dros performed on 2014-11-26 14:32:48 has no hits.

BS23696.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:11:56 Download gff for BS23696.complete
Subject Subject Range Query Range Percent Splice Strand
CG32117-RA 40..683 17..660 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:58 Download gff for BS23696.complete
Subject Subject Range Query Range Percent Splice Strand
CG32117-RA 40..683 17..660 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:10 Download gff for BS23696.complete
Subject Subject Range Query Range Percent Splice Strand
CG32117-RA 40..683 17..660 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:10 Download gff for BS23696.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12903029..12903672 17..660 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:58 Download gff for BS23696.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12896129..12896772 17..660 99   Minus

BS23696.pep Sequence

Translation from 16 to 663

> BS23696.pep
MTSFQIRLISDQNLVLVDALHHESEIFVPQIYNNDIVLWNIIRDRRSNPK
VEFCEEPVQGQGNGQICQRPQIQPRITTATAGLAPWAASIDGSPFRRVAE
EGSRCPLFSLKLISNGSVVLVECNVHESEIFLPQICGQYIAMKRITGHEL
LLPSKPKISAIQPAKTNCLRIQPTRFFSKTTNLDNQAKKRRKRKSQEQTN
HSGAGDQRTLKSVKR*

BS23696.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG32117-PA 215 CG32117-PA 1..215 1..215 1117 100 Plus