BS23705.complete Sequence
1073 bp assembled on 2011-02-07
GenBank Submission: KX800168
> BS23705.complete
GAAGTTATCAGTCGACATGAAACAAATCGTCGTGCTTTGCATATTCTCAC
TCTTTGCCAAAGATGCACAAACATTGCTCCTAAGCCAAATGGATTGGAAG
AATCTGCGCAACAGTGGAGCCTTGGACCTAAATGTCTTGCGCTGCTTTTT
GCGCGACAAAAACTATTGTCCCAGTCCACATATCGATCACCGTCTGTATG
CACCCAATGGACCGCGTCGTGGAACTCCTTTAAATGTTAAGAACCCAATA
ACGCTTTATAAAGGTGGATTTAGCAAGCACCGCGAGACTGTCTTCATAAT
ACACGGATTCAATGGAACTGCCATAGATATTCACCTGCAATTCCTTCGAG
ATGCTTACCTATCCCGCGATTTCAATGTCATTACAGTGGACTGGCGACCT
TTGACCCGCTATCCATGCTACCTCCACTCGCTTATAAACACCAGGTTAAC
TGCGCAATGCACCGCCCAGATCTACGCCTTCCTCACCCACTACGGAGCTG
TCCGGGAACGGATCACTTGCGTGGGTCACTCCCTGGGCGCCCACATCTGC
GGCATGATCAGCAACCACCTGACGCGGAAACAGTATCGCATCATTGGATT
GGATCCCGCCCGGCCTTTAATTGAGCGCATGAAGAGCAACAAGTTTCGGT
TGTCGATCGATGATGCCAACGTCATTCAGGTGCTCCACACCAATGCCGGT
TTCCTGGGCCAGGAGGATAACTCCGGGCATCTAAACTACTGTGTCAACGG
TGGACGCATCCAGCCGTTCTGCAAAGGAAATCCAATCAGAAAATCGCGAT
GTTCGCACTTCTTGAGCATCTGCTACTTGGCCACTGCCACATTTAAACAC
AATAAGTTCATGGGAGTACCGTGTCCCAATGGCTGCCTGAATCTTAGTGG
ATCCAAGAGGCTGCCAGTGAGCGGCAAAGTGAATCCCTTCGAGTTCGCCT
CGCTGATAAGGGAGTACCACATAGGCAACGATGCCCCCGATGACGCCCGA
GGCTGCATTTGCATTGATGTGCCGTATGCCAAGCACTGCCCCTTTACGGA
TGCGTAGAAGCTTTCTAGACCAT
BS23705.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6431-RB | 1041 | CG6431-PB | 1..1041 | 17..1057 | 5205 | 100 | Plus |
| CG6431-RC | 1056 | CG6431-PC | 204..1056 | 205..1057 | 4265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6431-RB | 1689 | CG6431-RB | 585..1630 | 17..1062 | 5215 | 99.9 | Plus |
| CG6431-RC | 1191 | CG6431-RC | 275..1132 | 205..1062 | 4275 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:20:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10727833..10728269 | 353..789 | 2185 | 100 | Plus |
| 2L | 23513712 | 2L | 10728352..10728556 | 789..993 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 10727605..10727753 | 205..353 | 745 | 100 | Plus |
| 2L | 23513712 | 2L | 10726300..10726443 | 61..204 | 720 | 100 | Plus |
| 2L | 23513712 | 2L | 10728613..10728681 | 994..1062 | 330 | 98.6 | Plus |
| 2L | 23513712 | 2L | 10726099..10726144 | 17..62 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:20:22 has no hits.
BS23705.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:57 Download gff for
BS23705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6431-RB | 560..1600 | 17..1057 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:25 Download gff for
BS23705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6431-RB | 585..1625 | 17..1057 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:23:31 Download gff for
BS23705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6431-RB | 585..1625 | 17..1057 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:23:31 Download gff for
BS23705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10728352..10728556 | 789..993 | 100 | -> | Plus |
| 2L | 10728613..10728676 | 994..1057 | 100 | | Plus |
| 2L | 10726099..10726144 | 17..62 | 100 | -> | Plus |
| 2L | 10726302..10726443 | 63..204 | 100 | -> | Plus |
| 2L | 10727605..10727753 | 205..353 | 100 | -> | Plus |
| 2L | 10727834..10728268 | 354..788 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:25 Download gff for
BS23705.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10728613..10728676 | 994..1057 | 100 | | Plus |
| arm_2L | 10726099..10726144 | 17..62 | 100 | -> | Plus |
| arm_2L | 10726302..10726443 | 63..204 | 100 | -> | Plus |
| arm_2L | 10727605..10727753 | 205..353 | 100 | -> | Plus |
| arm_2L | 10727834..10728268 | 354..788 | 100 | -> | Plus |
| arm_2L | 10728352..10728556 | 789..993 | 100 | -> | Plus |
BS23705.pep Sequence
Translation from 16 to 1056
> BS23705.pep
MKQIVVLCIFSLFAKDAQTLLLSQMDWKNLRNSGALDLNVLRCFLRDKNY
CPSPHIDHRLYAPNGPRRGTPLNVKNPITLYKGGFSKHRETVFIIHGFNG
TAIDIHLQFLRDAYLSRDFNVITVDWRPLTRYPCYLHSLINTRLTAQCTA
QIYAFLTHYGAVRERITCVGHSLGAHICGMISNHLTRKQYRIIGLDPARP
LIERMKSNKFRLSIDDANVIQVLHTNAGFLGQEDNSGHLNYCVNGGRIQP
FCKGNPIRKSRCSHFLSICYLATATFKHNKFMGVPCPNGCLNLSGSKRLP
VSGKVNPFEFASLIREYHIGNDAPDDARGCICIDVPYAKHCPFTDA*
BS23705.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:08:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6431-PB | 346 | CG6431-PB | 1..346 | 1..346 | 1884 | 100 | Plus |
| CG6431-PC | 351 | CG6431-PC | 36..351 | 30..346 | 1603 | 93.7 | Plus |
| CG13282-PB | 484 | CG13282-PB | 58..309 | 37..286 | 323 | 33.2 | Plus |
| CG14034-PC | 338 | CG14034-PC | 20..268 | 38..288 | 319 | 33.6 | Plus |
| CG14034-PB | 338 | CG14034-PB | 20..268 | 38..288 | 319 | 33.6 | Plus |
