BS23706.complete Sequence
374 bp assembled on 2011-01-27
GenBank Submission: KX800804
> BS23706.complete
GAAGTTATCAGTCGACATGCGTTACGTGGCTGCTTACCTTCTGGCCGTCC
TCGGTGGCAAGGACTCGCCCGCCAACAGCGATCTGGAGAAGATCCTCAGC
TCTGTGGGCGTTGAGGTCGACGCCGAGCGTCTGACCAAGGTCATCAAGGA
GCTGGCTGGCAAGAGCATCGACGACCTGATCAAGGAGGGTCGCGAGAAGC
TCTCCTCGATGCCGGTGGGCGGCGGTGGTGCCGTCGCAGCCGCTGATGCC
GCACCCGCTGCCGCCGCCGGTGGCGACAAGAAGGAGGCCAAGAAGGAGGA
GAAGAAGGAGGAGTCCGAGTCCGAGGATGACGACATGGGCTTCGCTCTCT
TCGAATAAAAGCTTTCTAGACCAT
BS23706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:34:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpLP2-RA | 342 | CG4918-PA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:34:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpLP2-RA | 604 | CG4918-RA | 93..436 | 15..358 | 1720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:34:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16586221..16586564 | 15..358 | 1720 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:34:55 has no hits.
BS23706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:48 Download gff for
BS23706.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpLP2-RB | 130..469 | 17..356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:30:49 Download gff for
BS23706.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpLP2-RA | 95..434 | 17..356 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:01 Download gff for
BS23706.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpLP2-RA | 95..434 | 17..356 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:01 Download gff for
BS23706.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16586223..16586562 | 17..356 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:30:49 Download gff for
BS23706.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12473728..12474067 | 17..356 | 100 | | Plus |
BS23706.pep Sequence
Translation from 16 to 357
> BS23706.pep
MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKS
IDDLIKEGREKLSSMPVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEES
ESEDDDMGFALFE*
BS23706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpLP2-PA | 113 | CG4918-PA | 1..113 | 1..113 | 551 | 100 | Plus |
RpLP1-PB | 112 | CG4087-PB | 28..112 | 23..113 | 146 | 43.6 | Plus |
RpLP1-PA | 112 | CG4087-PA | 28..112 | 23..113 | 146 | 43.6 | Plus |