BS23724.complete Sequence
1868 bp assembled on 2011-02-16
GenBank Submission: KX801485
> BS23724.complete
GAAGTTATCAGTCGACATGAATCGTATATCGAATCCTTCGCGTCGCCAGG
CGAGTGACGTCTTCATTGGTGACCCCTTCAAAATTCACTCATACAACTTT
CGCTATGCCGACAAGCCATTTTATCCGGTCCAGAACTATCAAAGACCTCC
GGCGGCACCGACTCCGCCGGCACTGGTGAAGAAGGCCTCCTTCCAGACCT
TCTACCACAATCCCAGATTCAGCCAGGATCCCGAGTACATTCCGGCAAAA
AAGAGTCCACAAACTAGCTCCTATAGGCGTCGCCTTTTGCTGGAATCTAT
GGATATGCCCTTGGGATCTACGGTGACAACGCCGGAGAGACAGAGTGTAC
CGGTGGCTCCGCAGACGAAGCGTTCTCCCACAGCCACGGATTCGCCGCTC
CTCAGGACATGCTGTCAAAGTGTGCGCTACGAGGCTATGAGACGGGGTCC
AAGCAACACGACTTTGTGCCAGAGTACCACGAATCTCATACGATCAGCTG
GCGGCGGTGTGCCTTCTACTTCAACCACCACCTTCTCCATGGACTCCAAC
GCCCATCTGCAGAACAGAAGAAGCGGCTGCGGTATCAGCATCGACATCTG
CAGTGTGGGTTCGCAATCTGAGGTGGACAACAATGTGAGCATCCAGATCG
CAACGGATGCCTATCTGCTGAACAATACGGACAAGGTGAGGACCAAGTCC
AAACCGGTGCGCTGTACGCCCAGATCCAGCGGCACCTTTGGCATCGACAA
GCGACTGTCCAAGTTCAATGTGAGCGAGACGAAACCTCGGACGAGTCCGG
AATGGGAGCTCCGGCAGAGAGAGAAGGCACGAGAAGCGGAGCGCCAACAA
AAACGGGAGCGGGATCGACAGTTGTTGGAGGACCGACGCTTGGAGCAGGA
GAGGGAACTTCAGGAGGAGCGAGAGCGTGCCCGCCAGCGGGAGCGAGATC
GTGAGCAGCTCCGCCAGTTGGAGCGCATGCGAGATGAGGAGCGACTCCTA
GAGTTGGAAGTGGAGCGCGAGAGGCAGCGATTGCGGGAACTAGAGCGGGA
AAACCAGCGGCACAGAGAATACGAGCGGCTGTGTGCCCTCCAGGAGCAGG
CGCGTCGGGAGCAAATGGATCTACTGTGCCAAGAGAACATACCTCCCCGA
CCGTCAGTTCCAATGACCTCGCACTTGTACACAACCACCTCTGATGATCG
TTTGCCCGGAATGGCCTTTTGTGATCTATCGTCCCGAAGGTCACGTCGAT
TGGAGAATCCGACCAGACCGAAAGAAAGACGGAAGACTAGAGTATGTCAG
GATCCTAGAAGTGTCTCGTCCGCTACCCGTTCACTTACTCCCCCGCCGAT
CCTTACCCGGAATAGCAGCTCCCCATCACCCTCTTCAGAAGCGCCGTCTT
CTACACCCACCTCCCGTTCCTCATCTCCAAATCGCAGGTCAAACCGCTGC
TTCAGTTCAACACCTAATCCCGATTCCCAACGATTCCCTCCTACAATTCC
AAGAGATCTAGTTCGCAGTAGTTCGGGAACTTCGAATGGCAATGTCCATG
TCACAGTGACCACCACCGGGCGACGGAGCAACTGCAGCATGAGGCGTTCA
TCCAATGACCGGGCTAGTGAGCAAAAGCAGCTAAATGGAAACCAAACCTG
CGTCGCCTGTCTGAATAATATGCCCATTAGGATAACCACATCTCGGTCCA
GGGATACGGATCTAGCCTTCAGTCTGAACCATGTGAGGATGAGGGGATCA
TCACCAGCGCCCACGGAAAGGAGCAGCAGTCAGGAAAGCCAAGATTCCTG
TCAGGTTAACATCAGCGTGTATGCGGATAAACTGCGTTTGATGCGTTTAT
AAAAGCTTTCTAGACCAT
BS23724.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13330-RA | 1836 | CG13330-PA | 1..1836 | 17..1852 | 9180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13330-RA | 2129 | CG13330-RA | 78..1913 | 17..1852 | 9180 | 100 | Plus |
| Vmat-RE | 7325 | CG33528-RE | 3221..5040 | 1852..33 | 9100 | 100 | Minus |
| Vmat-RF | 7141 | CG33528-RF | 3037..4856 | 1852..33 | 9100 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13515417..13517236 | 33..1852 | 9100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:44:19 has no hits.
BS23724.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:18:45 Download gff for
BS23724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13330-RA | 78..1911 | 17..1850 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:21 Download gff for
BS23724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13330-RA | 78..1911 | 17..1850 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:58 Download gff for
BS23724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13330-RA | 78..1911 | 17..1850 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:58 Download gff for
BS23724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13515336..13515351 | 17..32 | 100 | -> | Plus |
| 2R | 13515417..13517234 | 33..1850 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:21 Download gff for
BS23724.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9402841..9402856 | 17..32 | 100 | -> | Plus |
| arm_2R | 9402922..9404739 | 33..1850 | 100 | | Plus |
BS23724.pep Sequence
Translation from 16 to 1851
> BS23724.pep
MNRISNPSRRQASDVFIGDPFKIHSYNFRYADKPFYPVQNYQRPPAAPTP
PALVKKASFQTFYHNPRFSQDPEYIPAKKSPQTSSYRRRLLLESMDMPLG
STVTTPERQSVPVAPQTKRSPTATDSPLLRTCCQSVRYEAMRRGPSNTTL
CQSTTNLIRSAGGGVPSTSTTTFSMDSNAHLQNRRSGCGISIDICSVGSQ
SEVDNNVSIQIATDAYLLNNTDKVRTKSKPVRCTPRSSGTFGIDKRLSKF
NVSETKPRTSPEWELRQREKAREAERQQKRERDRQLLEDRRLEQERELQE
ERERARQRERDREQLRQLERMRDEERLLELEVERERQRLRELERENQRHR
EYERLCALQEQARREQMDLLCQENIPPRPSVPMTSHLYTTTSDDRLPGMA
FCDLSSRRSRRLENPTRPKERRKTRVCQDPRSVSSATRSLTPPPILTRNS
SSPSPSSEAPSSTPTSRSSSPNRRSNRCFSSTPNPDSQRFPPTIPRDLVR
SSSGTSNGNVHVTVTTTGRRSNCSMRRSSNDRASEQKQLNGNQTCVACLN
NMPIRITTSRSRDTDLAFSLNHVRMRGSSPAPTERSSSQESQDSCQVNIS
VYADKLRLMRL*
BS23724.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:15:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13330-PA | 611 | CG13330-PA | 1..611 | 1..611 | 3161 | 100 | Plus |
| CG2839-PA | 826 | CG2839-PA | 269..388 | 245..366 | 203 | 35.2 | Plus |
| CG2839-PA | 826 | CG2839-PA | 559..661 | 264..366 | 201 | 39.8 | Plus |
| CG2839-PA | 826 | CG2839-PA | 533..655 | 244..366 | 198 | 34.1 | Plus |
| CG2839-PA | 826 | CG2839-PA | 565..667 | 264..366 | 197 | 38.8 | Plus |
| CG7971-PG | 1062 | CG7971-PG | 491..792 | 253..594 | 197 | 25.4 | Plus |
| CG7971-PA | 1062 | CG7971-PA | 491..792 | 253..594 | 197 | 25.4 | Plus |
| CG7971-PC | 1107 | CG7971-PC | 491..792 | 253..594 | 197 | 25.4 | Plus |
| CG2839-PA | 826 | CG2839-PA | 310..410 | 264..366 | 196 | 41.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 577..679 | 264..366 | 193 | 37.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 583..685 | 264..366 | 193 | 37.9 | Plus |
| CG7971-PG | 1062 | CG7971-PG | 392..760 | 255..592 | 192 | 23.9 | Plus |
| CG7971-PA | 1062 | CG7971-PA | 392..760 | 255..592 | 192 | 23.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 571..673 | 264..366 | 191 | 36.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 595..697 | 264..366 | 186 | 35 | Plus |
| CG2839-PA | 826 | CG2839-PA | 601..703 | 264..366 | 186 | 35.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 316..416 | 264..366 | 184 | 36.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 589..691 | 264..366 | 184 | 35 | Plus |
| CG2839-PA | 826 | CG2839-PA | 274..399 | 243..366 | 183 | 34.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 531..631 | 264..366 | 182 | 38.8 | Plus |
| CG2839-PA | 826 | CG2839-PA | 613..715 | 264..366 | 181 | 34 | Plus |
| CG2839-PA | 826 | CG2839-PA | 304..404 | 264..366 | 180 | 35.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 485..625 | 244..366 | 177 | 33.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 607..708 | 264..365 | 174 | 32.4 | Plus |
| CG2839-PA | 826 | CG2839-PA | 474..589 | 258..366 | 170 | 37.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 643..750 | 264..371 | 169 | 29.6 | Plus |
| CG2839-PA | 826 | CG2839-PA | 444..554 | 253..366 | 168 | 33.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 615..721 | 258..366 | 168 | 32.1 | Plus |
| CG2839-PA | 826 | CG2839-PA | 631..733 | 264..366 | 167 | 30.1 | Plus |
| CG2839-PA | 826 | CG2839-PA | 637..748 | 264..373 | 167 | 33 | Plus |
| CG2839-PA | 826 | CG2839-PA | 625..727 | 264..366 | 166 | 30.1 | Plus |
| CG2839-PA | 826 | CG2839-PA | 328..427 | 264..366 | 165 | 34 | Plus |
| CG2839-PA | 826 | CG2839-PA | 352..466 | 264..366 | 161 | 38.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 346..455 | 264..373 | 159 | 33.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 318..421 | 258..366 | 158 | 32.1 | Plus |
