Clone BS23725 Report

Search the DGRC for BS23725

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:237
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG33230-RA
Protein status:BS23725.pep: full length peptide match
Sequenced Size:1373

Clone Sequence Records

BS23725.complete Sequence

1373 bp assembled on 2011-02-15

GenBank Submission: KX805518

> BS23725.complete
GAAGTTATCAGTCGACATGGGTCGCACGCAGCGTCGCCGGCATCAGAGGG
CCAAGAAGTCTGACGAGAATTCGGGCTCCCTGCACGACCTCTACGTTCAT
CTACACTCCGTTGGCTGGCAGAACCACACTCACTTGTCGGCCCAATACTA
CGAACAGACAGGTCGAGGACTATGCTCTAAACAGAAGACCTTTTCTCCGG
AGGATGAGCTCATTCGCCTGCCCATTGGCTGTCTCATAAGCATAGCGACT
CTGGAATCTGATGGGCCATTCAAAAGTCTTTTCGACGAAGAGTTATTTGA
CAAGGACTCCAGAATTTCCTTTCAGGCACTGATAGCCTGTTATATTTTGT
ACCACAAGCACTTGCAGGAGTGTACGCTAGGGACTCACTCCTCTACTTAC
GCTGCATATTTGGACACCCTGCCCAGGTGCTACTCCACTCCGTATTTCTG
CTCCATACCCGAGCTACAGTGTCTGCCAGAATCCCTGCTAGAGCGGACCG
TGGCCCAGAACCGTCAGATAAGAGGTTACTTTGAAATTATTAAGAACATT
GTACACAAATGCGATTGCTGTGGGAAGAGCTACGGCCAGGAGATTTGGAC
ACTCGCAGACTTTAAGTGGGCCTACTTCAGCGTGAACACTAGGAGCGTCC
ACCTCAGTTCCCGCTTTCTGAAAAAGCAGAGCAACTACTTTCAGCCGCTT
ATCAGTGGCGACACCAACCTGGCATTGGCTCCGTTTCTGGATCTTTTTAA
CCACTCAGATCAAGTGGAAATCACAGCAGGGATTGAGGGTCCCGATTACG
TTCTTACATTGAAATCTCTGCCATTTTCCGAGACCAAACCATATGATCAA
TTGTTCATCAGCTACGGTGCTTTGCCCAACTTTAAGCTATTGACGGAATA
TGGCTTTTGGCTAAGAGAAAATAAGCACGATTACTTTGAAGTCTCCCTAC
TGGACATTGAGCACATGATTAAGCAAAACAAGGAGCTATCAACGCAAACC
TTTCACCGGAACATCTTTAAATTCATCAGGGAGCACAATCTGAACGATCA
AATGTTCGTGCACATCGACGATGGATGCTCTCACAATCTAAGGGTTGTGC
TGCACCTGATCTTCAAGCAGCAGGCCTACTTTCCCAACATCCTCAACCAG
ATTGCCTTTGGAGACGCCGAGCAGTTTCAGGACGTGCAGCCAGAGCTGTC
GTACCTCGTAGAATATAAAATAAAGGAATACGAGATCTTTGGAGGAGAGC
TGGATAAGCTTCCTAAATTGACAGAAAGTGGTGCAGTGGCACGGTCTTAC
CTCCAAGAGTGTATCCGTTACCTCGTTGACTTTCAATCGGTGCATCTAGC
TGCATAGAAGCTTTCTAGACCAT

BS23725.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG33230-RA 1341 CG33230-PA 1..1341 17..1357 6705 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG33230-RA 1754 CG33230-RA 275..1626 17..1368 6745 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1618918..1620269 17..1368 6745 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 01:54:51 has no hits.

BS23725.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:38 Download gff for BS23725.complete
Subject Subject Range Query Range Percent Splice Strand
CG33230-RA 297..1637 17..1357 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:50 Download gff for BS23725.complete
Subject Subject Range Query Range Percent Splice Strand
CG33230-RA 275..1615 17..1357 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:11 Download gff for BS23725.complete
Subject Subject Range Query Range Percent Splice Strand
CG33230-RA 275..1615 17..1357 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:11 Download gff for BS23725.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1618918..1620258 17..1357 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:50 Download gff for BS23725.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1618918..1620258 17..1357 100   Plus

BS23725.pep Sequence

Translation from 16 to 1356

> BS23725.pep
MGRTQRRRHQRAKKSDENSGSLHDLYVHLHSVGWQNHTHLSAQYYEQTGR
GLCSKQKTFSPEDELIRLPIGCLISIATLESDGPFKSLFDEELFDKDSRI
SFQALIACYILYHKHLQECTLGTHSSTYAAYLDTLPRCYSTPYFCSIPEL
QCLPESLLERTVAQNRQIRGYFEIIKNIVHKCDCCGKSYGQEIWTLADFK
WAYFSVNTRSVHLSSRFLKKQSNYFQPLISGDTNLALAPFLDLFNHSDQV
EITAGIEGPDYVLTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGFWLR
ENKHDYFEVSLLDIEHMIKQNKELSTQTFHRNIFKFIREHNLNDQMFVHI
DDGCSHNLRVVLHLIFKQQAYFPNILNQIAFGDAEQFQDVQPELSYLVEY
KIKEYEIFGGELDKLPKLTESGAVARSYLQECIRYLVDFQSVHLAA*

BS23725.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:11:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG33230-PA 446 CG33230-PA 1..446 1..446 2378 100 Plus