BS23729.complete Sequence
656 bp assembled on 2011-01-27
GenBank Submission: KX803894
> BS23729.complete
GAAGTTATCAGTCGACATGGAGAAGATCTGGAAGAAGGTGTGCGAGCACC
ACGATGTGCCCGAGCAGGTGGCCAACGAGTGGTTCGCCCGCATTCAGCAG
CACCTGAGCTCCGAGGATCCCGCTCGCGCCTACCACAATTGGGAGGAGAT
GATGCGGCGCAAGGAGCCGCACTTGGCGGGCGTGGCCAATCCCAACATTG
TGCTGGCCGCCTTCTTCCAGTACTACCACTTCGATGGTAACCGCAGCTGT
GCGGAGAAGAACTGCGAGGTCTTTGAGGAGTTTTGCAATGATGCCGTCAT
CGAGGATGACCATGCAAAAAGCCTGGTATGTAATTTGCTGGGGCGCAAGA
CCCCGGAGAACCAGTTGACCTGGTGCCATGACGACGAGGCCAACTTGCTG
CAGGACGTAGACCTGGTGGTCCTAGCTGCTTCGCCGGAGGAGTACAAGCA
CTATACAACTCTCCTTCGCTCGGAGTACGCCAATCTCGACGATGCCACCT
ACAAGGCCATGCGCATCAAGGTGCTGGAGACCCTGCTGATGATTCCCTCC
ATCTACGCCACTGGAGACTACCACGACAAGTACGAAGAGCTAGCCCGCGC
CAACATACGCAACGAGATCAGCGAGCTGAAGAAGCAGTAAAAGCTTTCTA
GACCAT
BS23729.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:55:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42361-RA | 624 | CG42361-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42361-RA | 1001 | CG42361-RA | 122..746 | 17..641 | 3125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24607794..24608085 | 17..308 | 1460 | 100 | Plus |
| 2R | 25286936 | 2R | 24608319..24608533 | 427..641 | 1075 | 100 | Plus |
| 2R | 25286936 | 2R | 24608143..24608261 | 308..426 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:19 has no hits.
BS23729.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:34 Download gff for
BS23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42361-RA | 102..723 | 17..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:11 Download gff for
BS23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42361-RA | 122..743 | 17..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:38 Download gff for
BS23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42361-RA | 122..743 | 17..638 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:38 Download gff for
BS23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24607794..24608084 | 17..307 | 100 | -> | Plus |
| 2R | 24608143..24608261 | 308..426 | 100 | -> | Plus |
| 2R | 24608319..24608530 | 427..638 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:11 Download gff for
BS23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20495842..20496053 | 427..638 | 100 | | Plus |
| arm_2R | 20495317..20495607 | 17..307 | 100 | -> | Plus |
| arm_2R | 20495666..20495784 | 308..426 | 100 | -> | Plus |
BS23729.pep Sequence
Translation from 16 to 639
> BS23729.pep
MEKIWKKVCEHHDVPEQVANEWFARIQQHLSSEDPARAYHNWEEMMRRKE
PHLAGVANPNIVLAAFFQYYHFDGNRSCAEKNCEVFEEFCNDAVIEDDHA
KSLVCNLLGRKTPENQLTWCHDDEANLLQDVDLVVLAASPEEYKHYTTLL
RSEYANLDDATYKAMRIKVLETLLMIPSIYATGDYHDKYEELARANIRNE
ISELKKQ*
BS23729.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42361-PA | 207 | CG3579-PA | 1..207 | 1..207 | 1116 | 100 | Plus |
