BS23731.complete Sequence
1121 bp assembled on 2011-02-08
GenBank Submission: KX802879
> BS23731.complete
GAAGTTATCAGTCGACATGAAGCTCGGATTTCTGGGGCTTTTTGGCATGG
TGCTCATGATCATGTTCTACGAGGGAGCAGAAGGGTATACCGTCAATGAG
CTGCGCGATGTCCTGGGGATCTATGTCGATTATCCAACACTGCGCAGGTG
GTACGAGGATGTCCGAGCTTATCACTATTTAAATTCGGAAAACACAAAAC
TGTTTTCGCTGCGTTACGCTTACTACGACGACGTAGGAGATTTAGAACTC
GTGAAAGGGTACAACAGTGTAGTCCTAGAAGGAGTAGGAGAAGGAAATGT
GGTTCTTCGAGAGGGTCGGCCAAGGGGTGTGGACTTCGACCAGGGGGCGA
GTATAATAATCAACGACGATATCGACAAAGCCTCTCATGCGAAAATCTTC
AGTTCTTATAGCCGTCGTTCGTTCAATAGTACAGTAACTGTGCTGGGGAT
TACTGTTAGCTACTTTAAGGCCAAATGGAAGTATCCATTCGATAAGTCCC
AGACGAAAGTGGAACAGTTTTACAACGACGGCGGCTCGCCGGCAGGTAAG
GTGGAGATGATGGTGCAAACGGGGAAGTATGCCTACGTCAATAATGTAAA
GGGTCTGCAAGCGGATGTCCTGGAGCTACCTTTTGGGGAACATGAGCTAG
TAATGATCGTCTTACTGCCGAAGTCATCCCAGGGAGTTAACCTGGTGCTC
TACCAATTGAAGAACCTGGGACTACATCGCCTCCTTGAGAAACTCGAGGC
CTCCAAGAATGAAACTGATGTAGAAGTCAAGCTTCCCAAGTTCGATACGC
GATCCGTACTTTCACTCGAAGATACCGTATATGACGCTGGACTAACGGAT
CTGAGGAACGACTTCGCAGATCTAGATAAATTGCTGATTGCTATCGGTCA
CAGAGGTGCGTGCCTCACCCTCTACCACCAATTCGCCAGGATCGTCGTAG
ATGAAGAGGGTTTGCCTAATGCTGTTCCGCAGAAGTCTTCTGGAAAAAAT
AACATCAAGTTCCATGTAAACAGGCCGTTTGCATACCTTGTCCTACAAAA
GAAACACAAATTGCTCATTCACTCCGGAGTCTTTCGGGAAGGTGAGATCC
AGTAAAAGCTTTCTAGACCAT
BS23731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn77Bb-RA | 1089 | CG6663-PA | 1..1089 | 17..1105 | 5445 | 100 | Plus |
| Spn77Bc-RB | 1251 | CG6289-PB | 202..1251 | 56..1105 | 4560 | 95.6 | Plus |
| Spn77Bc-RA | 1251 | CG6289-PA | 202..1251 | 56..1105 | 4560 | 95.6 | Plus |
| Spn77Bc-RB | 1251 | CG6289-PB | 1..40 | 17..56 | 185 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:27:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn77Bb-RA | 1161 | CG6663-RA | 35..1123 | 17..1105 | 5445 | 100 | Plus |
| Spn77Bc-RB | 1430 | CG6289-RB | 241..1290 | 56..1105 | 4560 | 95.6 | Plus |
| Spn77Bc-RA | 1440 | CG6289-RA | 251..1300 | 56..1105 | 4560 | 95.6 | Plus |
| Spn77Bc-RB | 1430 | CG6289-RB | 40..79 | 17..56 | 185 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:27:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20321638..20321994 | 480..836 | 1785 | 100 | Plus |
| 3L | 28110227 | 3L | 20343497..20343851 | 480..834 | 1610 | 96.9 | Plus |
| 3L | 28110227 | 3L | 20321269..20321572 | 178..481 | 1520 | 100 | Plus |
| 3L | 28110227 | 3L | 20343128..20343431 | 178..481 | 1490 | 99.3 | Plus |
| 3L | 28110227 | 3L | 20322051..20322320 | 836..1105 | 1350 | 100 | Plus |
| 3L | 28110227 | 3L | 20343910..20344179 | 836..1105 | 1035 | 92.2 | Plus |
| 3L | 28110227 | 3L | 20321041..20321201 | 17..177 | 805 | 100 | Plus |
| 3L | 28110227 | 3L | 20342939..20343060 | 56..177 | 445 | 91 | Plus |
| 3L | 28110227 | 3L | 20342738..20342777 | 17..56 | 185 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:27:21 has no hits.
BS23731.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-09 09:49:57 Download gff for
BS23731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn77Bb-RA | 25..1111 | 17..1103 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:58:43 Download gff for
BS23731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn77Bb-RA | 35..1121 | 17..1103 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:01:38 Download gff for
BS23731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn77Bb-RA | 35..1121 | 17..1103 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:01:38 Download gff for
BS23731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20321041..20321201 | 17..177 | 100 | -> | Plus |
| 3L | 20321269..20321572 | 178..481 | 100 | -> | Plus |
| 3L | 20321640..20321993 | 482..835 | 100 | -> | Plus |
| 3L | 20322051..20322318 | 836..1103 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:58:43 Download gff for
BS23731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20314141..20314301 | 17..177 | 100 | -> | Plus |
| arm_3L | 20314369..20314672 | 178..481 | 100 | -> | Plus |
| arm_3L | 20314740..20315093 | 482..835 | 100 | -> | Plus |
| arm_3L | 20315151..20315418 | 836..1103 | 100 | | Plus |
BS23731.pep Sequence
Translation from 16 to 1104
> BS23731.pep
MKLGFLGLFGMVLMIMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYEDVR
AYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVVLREG
RPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYF
KAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMVQTGKYAYVNNVKGLQAD
VLELPFGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNET
DVEVKLPKFDTRSVLSLEDTVYDAGLTDLRNDFADLDKLLIAIGHRGACL
TLYHQFARIVVDEEGLPNAVPQKSSGKNNIKFHVNRPFAYLVLQKKHKLL
IHSGVFREGEIQ*
BS23731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:02:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn77Bb-PA | 362 | CG6663-PA | 1..362 | 1..362 | 1869 | 100 | Plus |
| Spn77Bc-PB | 416 | CG6289-PB | 67..416 | 13..362 | 1664 | 92 | Plus |
| Spn77Bc-PA | 416 | CG6289-PA | 67..416 | 13..362 | 1664 | 92 | Plus |
| Spn77Ba-PC | 450 | CG6680-PC | 108..445 | 13..357 | 407 | 32.4 | Plus |
| Spn77Ba-PB | 450 | CG6680-PB | 108..445 | 13..357 | 407 | 32.4 | Plus |
