BS23735.complete Sequence
1130 bp assembled on 2011-02-18
GenBank Submission: KX801980
> BS23735.complete
GAAGTTATCAGTCGACATGCTTTTGGCCCGTTTAAACCATGTGCTGTCAG
GACGACCGATGCGCCTTTTGGGCCAGTCTGGATGTCCTCGCCTGTGGAGC
TCAGCCCATGCGCAGATGAACAGTAATTCCTTAAGAACACCTTCCTTGGC
TCAAGGAAAGTCAGTGATTCCTAAAAGGAATATGCAAGAACTTGGGATGA
GAAAGTATTCCAGGGAGTCGAGAGATCGCGATCGTTCCCAACTGGAGAGT
CGAACCAGAGGTCCTTCCCTCAAGGAGCGCATGATGGGACCCCCCAGTGA
AAATGCTTACTCCATGGGCAAGGGAGCGGCGGCTGGAGCGGCTCTGATGG
GTCTCGTGGGTCTGTGCTACTATGGTCTGGGCCTTGCCAATCAACCGAGT
ATCTACGACCACTCGATGGTGTGGCCCCAGTACGTGAGGGATCGTATTCA
TGCCACCTATGCCTATTTCGGAGCATCCTGTGGTGTAACAGCTGCTTCAG
CCGTTGCCTTTTTCCAATCGGATGCCATGATGGCTCTGATGACGCGTTCT
GGATGGGTTGCCTCATTGGTTACCCTGGGACTGGTAATGCTCAGTGGATC
CATTGCACAAGGCCTAGAATATCAGCCGGGATTCGGAGCCAAGCAGCTGG
CCTGGCTCGTCCACTGTGCCGTTCTGGGAGCTGTCCTGGCACCCATGTGC
CTCCTGGGTGGACCCATTTTGACCAAGGCCCTTTTGTACACCAGCGGAAT
CGTGGGTGCCCTGTCCACCGTGGCCGCTTGTGCCCCGAGCGAAAAGTTCC
TGCATATGGGCGGACCGCTGGCCATTGGATTGGGCGTGGTCTTCGCCTCC
TCGCTAGCCTCCATGTGGTTGCCGCCCACTACTGCAGTGGGGGCGGGACT
GGCCAGCATGTCGTTGTACGGCGGACTGATTCTGTTCAGCGGATTTCTTC
TGTACGATACCCAAAGGATCGTTAAGTCGGCGGAGTTGTATCCCCAGTAC
AGTAAATTCCCTTACGATCCAATTAATCATGCCCTGGCCATTTACATGGA
TGCGCTCAACATCTTTATCCGCATCGCAATTATATTGGCTGGAGACCAAA
AGAGGAAGAACTGAAAGCTTTCTAGACCAT
BS23735.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:55:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1287-RA | 1098 | CG1287-PA | 1..1098 | 17..1114 | 5490 | 100 | Plus |
| CG2076-RB | 1026 | CG2076-PB | 538..991 | 623..1076 | 545 | 74.7 | Plus |
| CG2076-RA | 1026 | CG2076-PA | 538..991 | 623..1076 | 545 | 74.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1287-RA | 1426 | CG1287-RA | 129..1231 | 12..1114 | 5500 | 99.9 | Plus |
| CG2076-RB | 1491 | CG2076-RB | 907..1360 | 623..1076 | 545 | 74.7 | Plus |
| CG2076-RA | 1319 | CG2076-RA | 735..1188 | 623..1076 | 545 | 74.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7501146..7502248 | 1114..12 | 5500 | 99.9 | Minus |
| X | 23542271 | X | 11091354..11091610 | 623..879 | 505 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:55:38 has no hits.
BS23735.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:24 Download gff for
BS23735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1287-RA | 134..1230 | 17..1113 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:37 Download gff for
BS23735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1287-RA | 134..1230 | 17..1113 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:28 Download gff for
BS23735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1287-RA | 134..1230 | 17..1113 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:28 Download gff for
BS23735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7501147..7502243 | 17..1113 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:37 Download gff for
BS23735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3326869..3327965 | 17..1113 | 100 | | Minus |
BS23735.pep Sequence
Translation from 16 to 1113
> BS23735.pep
MLLARLNHVLSGRPMRLLGQSGCPRLWSSAHAQMNSNSLRTPSLAQGKSV
IPKRNMQELGMRKYSRESRDRDRSQLESRTRGPSLKERMMGPPSENAYSM
GKGAAAGAALMGLVGLCYYGLGLANQPSIYDHSMVWPQYVRDRIHATYAY
FGASCGVTAASAVAFFQSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGL
EYQPGFGAKQLAWLVHCAVLGAVLAPMCLLGGPILTKALLYTSGIVGALS
TVAACAPSEKFLHMGGPLAIGLGVVFASSLASMWLPPTTAVGAGLASMSL
YGGLILFSGFLLYDTQRIVKSAELYPQYSKFPYDPINHALAIYMDALNIF
IRIAIILAGDQKRKN*
BS23735.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:30:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1287-PA | 365 | CG1287-PA | 1..365 | 1..365 | 1873 | 100 | Plus |
| CG2076-PB | 341 | CG2076-PB | 34..341 | 55..364 | 1089 | 67.1 | Plus |
| CG2076-PA | 341 | CG2076-PA | 34..341 | 55..364 | 1089 | 67.1 | Plus |
