BS23748.complete Sequence
2141 bp assembled on 2011-07-18
GenBank Submission: KX805517
> BS23748.complete
GAAGTTATCAGTCGACATGAAATTTCTGAGTGATATTTTTCGTGTAGCAG
ATTTGTGCCAAATAGACGGAGTGCGCCAGGCATGGCCTTCGTCGCACCAA
TCTAGCATTCCCCGTAGACTACGGATGCCTGAACAACCTGAACCGAACTA
CTTGGATGAGCCGGAGACAATCTCCGTCGGGCGATTCATCTTCAAGATCA
TAAGGATTGGTGCGCTTCTGCTGATTTGGGCTTTCTTTACTTACATTCTG
GTTCGGAATGCCACCACGCCGGATTTGACATCGGTGGTCACTGTGTTGCC
CAACGAGACTGTGCTCCGCCGCCTGTCCGTGCCCCATGATGCGACTCAGA
TAACGCTGAAGGGTCCCATCGATTTGCAATTGCAGAAGCATGAAAGCGTG
ATTATGGAGACGCCCCATGTGGGCGTACGCGTGGAGTGGCGGGATTCGGA
ATTGAAAACCAAATTCTGGAGTTCGGATATGTGGATTGTCTATCTGGCCG
AGCAGAGTCAGGCTTTCACGAAGACGTCCAAAACCGTTCAGATCTCGGAG
GTTAGTAATGCCCAGGCGGTGATTTCGCTGGAGAGCAGAAGCGAGGAGCC
GGTGGCGCTGCTGATGGTGGTATCGGTGTATCCCTTGGTAACGGAAAATG
GTGTACTCTATGCCGCTCTGCTGCTGATCGGTTTCTATATACTGATCGTC
TTCGAGCTTACGGATCGTACATTCGCTGCTCTTATGATGGCCACCACTGG
GATAGCGATTCTAACGGCGCTGGGAAATCGACCGACTCTGGAAACAATAA
TCTCCTGGATTGATTTCGAAACTCTAATACTGCTCCTCGGTATGATGATA
CTGGTGGCGATAATGTCCGAGACGGGTGTATTTGATTGGATGGCTGTGCT
GGCGTACCGAATATCCAAGGGTAATCCCTGGCCAATGCTCCTGCTGCTCA
GCTCAATTACCGCCATCATGTCCTGTATGCTCGATAATGTGACCATGCTG
CTTCTGATGGCGCCAATTGCGATCCGTTTGTGCGAAGCCATGGCCGTCCA
GACGCCACTTGTCCTGATAGTGGTGGTGATGTACTCAAATATCGGTGGCA
CCCTCACGCCAGTGGGTGATCCACCCAATGTGATCATTGCCACCAATTCG
GAAGTGATCTCCGCCGGAGTGGATTTCCTCGATTTCACCATTCACATGTT
GCCTGGCGTTTTATTGGCGGCTGTAGCGGGCTATGCTGTCATGTATGTGA
CCATGAGGAAATCTTTGTTTAAACTGGAGGAACAACAACTTGAGCTGGCA
GCTGAGCGGGAGAACAGTAGACGGCGATCGAGTGCGGATATTACGGCTCG
GGCAGAAGAAATGCGCATACGACAGCCGACGGGACGACAGTTACTGAAGC
CGGCCGAAAACTATTTTCAGACCCTGGCCCATTTGGAGGCACATCATCGG
ATCCGGGACAAGACGCTGCTGATCAAGTGCCTCTTCACGCTGTGTTTTGT
GATCATATTTTTCCTGTTGCATTCACTGCCCTTTATGCACGGTGCCACAT
TGGGTTGGGTGGCAATTTTGGCCGCCTTCCTGCTTCTCATTCTGGCCAAG
ATGAACGACATTGAGGCGATACTTGACCAGGTCGAATGGTCAGCGCTGCT
CTTTCTGGCCGCTCTATTCGTGCTCACTGAGGCGGTGGATAAATTGGGCT
TCATTCGCTGGCTGTGTGATCTCACAGTCAAGGTGATCATGAGCGTCGAG
GAGCGTTATCAGACGACAGTGGCCATCCTGATAATCATCTGGATGTCCGC
CATTCTGGCGGCCTTTGTCGGCAATGTCCCGGTGACCACGATGCTGCTGA
GACTGAACATTGAGTTGCACCGTAACGATGCCATCAGCGTTCCATTAACG
CCCCTCATTTGGGCTTTGTCATATGGCGCCTGTTTCGGTGGTAATGGCAC
CCTGATCGGGGCTTCGGCCAATGTTGTCGCAGCGGCAATCGCCCAACAGT
ATGGCTATAAGATCTCCTTTGTGCAGTTCTTCATCTACGGCTTTCCCATG
ATGCTGACCAGTATTTTTCTCGCAACGGTTTACCTGCTCATCGCGCACTC
GCTATTCGCGTGGCACAAGACGTAGAAGCTTTCTAGACCAT
BS23748.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:44:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11262-RA | 2109 | CG11262-PA | 1..2109 | 17..2125 | 10545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:44:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11262-RA | 2284 | CG11262-RA | 50..2158 | 17..2125 | 10545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:44:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12995184..12997292 | 17..2125 | 10545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:44:07 has no hits.
BS23748.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-18 16:37:06 Download gff for
BS23748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11262-RA | 50..2158 | 17..2125 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:35:04 Download gff for
BS23748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11262-RA | 50..2158 | 17..2125 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:58 Download gff for
BS23748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11262-RA | 50..2158 | 17..2125 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:58 Download gff for
BS23748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12995184..12997292 | 17..2125 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:35:04 Download gff for
BS23748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12988284..12990392 | 17..2125 | 100 | | Plus |
BS23748.pep Sequence
Translation from 16 to 2124
> BS23748.pep
MKFLSDIFRVADLCQIDGVRQAWPSSHQSSIPRRLRMPEQPEPNYLDEPE
TISVGRFIFKIIRIGALLLIWAFFTYILVRNATTPDLTSVVTVLPNETVL
RRLSVPHDATQITLKGPIDLQLQKHESVIMETPHVGVRVEWRDSELKTKF
WSSDMWIVYLAEQSQAFTKTSKTVQISEVSNAQAVISLESRSEEPVALLM
VVSVYPLVTENGVLYAALLLIGFYILIVFELTDRTFAALMMATTGIAILT
ALGNRPTLETIISWIDFETLILLLGMMILVAIMSETGVFDWMAVLAYRIS
KGNPWPMLLLLSSITAIMSCMLDNVTMLLLMAPIAIRLCEAMAVQTPLVL
IVVVMYSNIGGTLTPVGDPPNVIIATNSEVISAGVDFLDFTIHMLPGVLL
AAVAGYAVMYVTMRKSLFKLEEQQLELAAERENSRRRSSADITARAEEMR
IRQPTGRQLLKPAENYFQTLAHLEAHHRIRDKTLLIKCLFTLCFVIIFFL
LHSLPFMHGATLGWVAILAAFLLLILAKMNDIEAILDQVEWSALLFLAAL
FVLTEAVDKLGFIRWLCDLTVKVIMSVEERYQTTVAILIIIWMSAILAAF
VGNVPVTTMLLRLNIELHRNDAISVPLTPLIWALSYGACFGGNGTLIGAS
ANVVAAAIAQQYGYKISFVQFFIYGFPMMLTSIFLATVYLLIAHSLFAWH
KT*
BS23748.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11262-PA | 702 | CG11262-PA | 1..702 | 1..702 | 3530 | 100 | Plus |
| CG31693-PA | 688 | CG31693-PA | 1..683 | 1..700 | 1452 | 41.8 | Plus |
| CG13801-PA | 690 | CG13801-PA | 23..690 | 57..700 | 1449 | 43.5 | Plus |
| CG31693-PB | 607 | CG31693-PB | 1..602 | 90..700 | 1412 | 44.1 | Plus |
| hoe1-PA | 803 | CG12787-PA | 115..803 | 48..700 | 1368 | 43.2 | Plus |
