Clone BS23755 Report

Search the DGRC for BS23755

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:237
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG17122-RA
Protein status:BS23755.pep: full length peptide match
Sequenced Size:1829

Clone Sequence Records

BS23755.complete Sequence

1829 bp assembled on 2011-02-18

GenBank Submission: KX802570

> BS23755.complete
GAAGTTATCAGTCGACATGCCGCCGAAAGTGAAGAAGGAGAAGAAGGATG
TGAACAAGGTGACCCAGGTGGACAGAACCTTCTACGAGCTGACCATCACG
GATCTCAACCAGAAACTAGCTCGACTGCGATCCCACGTGACCACCGTCGA
TGAGTCCAACATCACGCTGACCGAGAAACTCAAGGAAGTGGAGGCCGATG
GCGTCGACGTGGCCGCTCACTTGGAACGCACCCTGGCGGAGAGGAATAAC
TCGATCACCGAACTGGAGGAGCGCCTGGTAGAGATCACCAAGGTGCGGGA
TGTGGAGAACCGCGTGGCACAGGAGAAGATCGGCGACTTGGAGTCGAAAT
ACAAGGCCATGCACGACCAGTTGACCTCCGAAATAAAGCTGCTTAATGGC
AAGCTGAATTCCCTCGACGAGTTCCGCATCCAGAGGGATGTCCTGTTGGC
CAAGTTCGATGAGCAGGAGGCGGATCTCAATGAGCGCGAGAAGGATCACA
AGGAGGCGCTCTATAATATGGAACAACGAGCTGTGGTGGAGAAGGATGCG
CTAAAAAAGGAGGTCGAACAGAAGCTGCTGCAAGTTTCCGAGGACTTCAC
CCGGTCCAGTGAGATCCGCAACGCTGGCTACACCCGCCGCCTGATTCGTG
AGAACATAGCCCTGCAAAAGGAGATCGATCTACTGGTCATGTCCCAGATA
AAACTGCAGCAGGCATATACCAACCAGAAGTCCAAGCACAAGGAGATGGA
GGAGCAGTACAGTGCCCTCGATCAAATCAAAAACGAGCTGGTCCGCAACT
CCGTGAACAAGATCAAAATCATTGAGGGTCTGACCAGGAACTACGAGAAA
CTGAAAGCCAAGTACGTGGAGGTACTGCGCTACAAGAAGGCCTATGAATC
CCTTCTCCAAGCTGAAAAGTGCGAGAATGTCAAGCAAAAGGATGCGGCCG
GAAAACTCCGGACCCTGGCCAAGCGAATGGAGATTTTGGATCTGGACAAT
CGAAATCTGGAGGTGGTCCATGCCCAGCACGAGATCGAGATTACTCGACT
GCGTGGAGTCATTCAAGAGATCAAGTGCACTGTGCGGGATGCGATTGTGG
CGGAGCAGGCAGCCAAGAAATTCCCGGAGAGATTAGTCGAGGCCAATGTG
GATGATCCCGCAATGATAAATGAAGTTCGGGAGGAGGCCATATCCCTTTG
CAAGCTGAAACGCAGCGATTTGCTCTCCCAGCTTATGAGCATCGTGAGCT
CCCATTCGGAGGAGCTTCCGAAGACTCCATCGATTGCCTCCATTGTCAGT
GCCACCTCATCGCTGTATGCTCCAGGTAAAATGGGCTTCATGCCCACGAG
ACCCAAAGCAACGCCATTCGACGCCTTCCGCAGCGAGGTCATCGAACAGG
AGCCGGATCGCACCGTTCCGGAGGATCTGCAAAAGCAGAAGATGCAGGAT
CGGCTAATGACCTCGTTGCGAGGTGACGAGAATACCATAATCGATGTGGA
ATTCGGCACTACTCTATACGTTTCATCATCGCGCGAGGACGATCTCATTG
AGGTGGAGGAGGAGCCACTGGAGGAGCCAGAGGGTTCCACCAGCTCCATG
TCTGTGAAGAAGGCCAGCAGTGAGGGTTCAGTGGCTCCGCCCGAAACCGT
ACCGCTAGCCGTTTCCGCATCCTCGAAGGACATCAAGGGTGCTCCCAGCA
TTGGGGCTCTGGACACACTGACGGCCACATCCAAAATGACGGGTGTTACC
AACGAGGACGAGGGCGAGGAGGAAGGCGAGGAGGAGGACTTCGATGTGCA
GTTCGTCTACTAGAAGCTTTCTAGACCAT

BS23755.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17122-RA 1797 CG17122-PA 1..1797 17..1813 8985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG17122-RA 1947 CG17122-RA 82..1879 17..1814 8990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20273457..20275254 1814..17 8990 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:36:44 has no hits.

BS23755.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:58 Download gff for BS23755.complete
Subject Subject Range Query Range Percent Splice Strand
CG17122-RA 82..1878 17..1813 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:50 Download gff for BS23755.complete
Subject Subject Range Query Range Percent Splice Strand
CG17122-RA 82..1878 17..1813 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:24 Download gff for BS23755.complete
Subject Subject Range Query Range Percent Splice Strand
CG17122-RA 82..1878 17..1813 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:24 Download gff for BS23755.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20273458..20275254 17..1813 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:50 Download gff for BS23755.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20266558..20268354 17..1813 100   Minus

BS23755.pep Sequence

Translation from 16 to 1812

> BS23755.pep
MPPKVKKEKKDVNKVTQVDRTFYELTITDLNQKLARLRSHVTTVDESNIT
LTEKLKEVEADGVDVAAHLERTLAERNNSITELEERLVEITKVRDVENRV
AQEKIGDLESKYKAMHDQLTSEIKLLNGKLNSLDEFRIQRDVLLAKFDEQ
EADLNEREKDHKEALYNMEQRAVVEKDALKKEVEQKLLQVSEDFTRSSEI
RNAGYTRRLIRENIALQKEIDLLVMSQIKLQQAYTNQKSKHKEMEEQYSA
LDQIKNELVRNSVNKIKIIEGLTRNYEKLKAKYVEVLRYKKAYESLLQAE
KCENVKQKDAAGKLRTLAKRMEILDLDNRNLEVVHAQHEIEITRLRGVIQ
EIKCTVRDAIVAEQAAKKFPERLVEANVDDPAMINEVREEAISLCKLKRS
DLLSQLMSIVSSHSEELPKTPSIASIVSATSSLYAPGKMGFMPTRPKATP
FDAFRSEVIEQEPDRTVPEDLQKQKMQDRLMTSLRGDENTIIDVEFGTTL
YVSSSREDDLIEVEEEPLEEPEGSTSSMSVKKASSEGSVAPPETVPLAVS
ASSKDIKGAPSIGALDTLTATSKMTGVTNEDEGEEEGEEEDFDVQFVY*

BS23755.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:30:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17122-PA 598 CG17122-PA 1..598 1..598 2957 100 Plus